Sciurus carolinensis (gray squirrel): 124990616
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Entry
124990616 CDS
T08117
Name
(RefSeq) transcription factor EC isoform X1
KO
K15591
transcription factor EC
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124990616
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124990616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3371
HLH
MITF_TFEB_C_3_N
Motif
Other DBs
NCBI-GeneID:
124990616
NCBI-ProteinID:
XP_047416736
EnsemblRapid:
ENSSCRG00010012071
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All DBs
Position
8:36668925..36876077
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AA seq
405 aa
AA seq
DB search
MLQALTGLQFQLESQIGEKERRLQLGPESRTHFHMQFSYKPVFHSLFPARPEILSSQLPS
FSKVPAHLESPARPQLQRSQKQQVKPFMTLDHQIVHQTLKQSHPPGPSCALLTQHGLTSP
DNDAGLPGTPLTKSLALGKEDGSEEWHLSGSILDVYSGEPGISPVNMGLTNASCPSGLPM
KREITETDTKALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTIL
KASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARAHGLPTLASHGTVD
LGAHVTKQQSHPEQNSVDYCQQLTLSQGPSPELCDQAMAFSDPLSHFTDLSFSAALKEEQ
RLDDMLLDDTISPFGTDPLLSAASPAVSKASSRRSSFSSEDGDEL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagctttaaccggactccagtttcagctggaatcacaaataggagaaaaagag
aggagacttcaacttggccctgagtccaggacacacttccacatgcagttttcatacaaa
cctgtgtttcatagtcttttcccagcaagaccagaaattttgtcaagtcaattaccatcc
ttttccaaggtcccagcacacctggaaagtcctgcaagacctcagctacagagatcccag
aaacagcaagtaaaacccttcatgacccttgaccaccaaatcgtccaccagactctcaaa
cagtcacaccctccagggccaagctgtgcgcttctgacacaacatggactcacaagtcct
gacaatgatgctggcctcccaggaaccccactcaccaagtcactagctcttgggaaagaa
gatggcagtgaggaatggcatttatctggaagcattttggatgtctatagtggcgaaccg
gggatttcaccagttaatatggggcttacaaatgcttcctgtccaagtggtttaccaatg
aaaagagaaattacagaaactgacactaaagctttggcaaaagaaagacaaaaaaaggac
aatcacaacctcattgaaagaagaagaaggtataatattaattaccgaatcaaggagctt
ggcacacttattccaaagtctaatgatcctgatatgcgctggaacaaaggaaccatccta
aaagcatcagtggagtacatcaagtggctacaaaaagaacaacaaagagcccgggagtta
gaacacagacagaagaaattagagcaggctaacaggcgacttctactccggattcaggaa
ctagaaatacaggctcgagctcatggtctgccaaccctggcttcacatggcaccgttgat
ttaggtgcccacgtcaccaaacagcagtcccatcctgagcagaattcagtagactattgc
caacaactgactctgtctcaggggccaagccctgagctctgtgatcaagctatggccttt
tctgatcctttgtcacacttcacagatttatcatttagtgccgctttgaaagaggaacaa
agattggatgacatgctactggacgacacaatatccccctttggaacagatcctctgcta
tccgctgcttcccctgcagtttccaaagcaagcagtaggagaagtagctttagctcagag
gatggtgatgagttataa
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