Sciurus carolinensis (gray squirrel): 124992769
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Entry
124992769 CDS
T08117
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124992769
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124992769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124992769
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124992769
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124992769
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124992769
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124992769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
124992769
NCBI-ProteinID:
XP_047419975
EnsemblRapid:
ENSSCRG00010016839
LinkDB
All DBs
Position
9:50101352..50206162
Genome browser
AA seq
876 aa
AA seq
DB search
MQRRGALFSMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAVFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKDA
ELPVLLCTEYKPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSE
NPSDVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEAN
RRPLPELVRAKIPFSACLQAFSEPDNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKK
FTFGLDWVPKKFDVSIDMPDLLDISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQL
IDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTIPG
YGGAASAGASVFGATGLDNQPPEEIVAIITSMGFQRNQAVQALRATNNNLERALDWIFSH
PEFEEDSDFVIEMENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCH
IKKEGRWVIYNDHKVCASERPPKDLGYLYFYRRIPS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgagctgctggtgcctcacatgcccaccatccgcgtgcccaggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactcccccaactctgaaggt
ggactctatgtatgcatgaatacattcttggcttttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtgtacatgcacctgaaaagacatgtgcgagagaaggta
agaggggcatctggtggagctttaccaaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagatcactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcctgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagac
acatgggaaaatgagttgccagtatctaaatatgccaataacctcacccagttggacaat
ggtgtcaggattcctccaagtggttggaagtgtgccaggtgtgacctgcgggagaacctc
tggttgaatctgaccgacggctctgtcctgtgtgggaagtggttcttcgacagctctggg
ggtaatgggcatgcgctggagcattatagagacatgggctaccctctggctgtgaagctg
ggaaccatcactcccgatggggcagatgtttattcttttcaagaagaggaacctgttttg
gatcctcatttggccaagcacttagcgcattttggaattgatatgcttcacatgcatggg
acagagaatgggcttcgggacaatgacatcaagcccagggtcagcgaatgggaagtgatc
caggagtcggggacgaaactgaagcccatgtatggccccgggtacacgggtctgaagaac
ctggggaacagctgctacctcagttcagtcatgcaggccgtcttcagcatcccggaattc
cagagagcgtatgtaggaaaccttccaagaatatttgactactcacccttagatccaaca
caagatttcaacacacagatgactaagttaggacatggacttctctcgggccagtattca
aagcctccagtgaaatcggagctcattgagcaggtgatgaaggaggagcacaaggacgca
gaactcccggtattgctgtgcacagagtacaagcctcaacagaacgggatctctccacgc
atgtttaaggcctttgtcagcaagagccacccggagttttcctctaacagacagcaggat
gcccaggaatttttcttgcacttggtgaatctcgtagagaggaaccgcatcggctcagaa
aacccaagtgatgtttttcggtttttggtggaagagcgtattcagtgctgtcagacccgg
aaagtccgctacacggagagggtggattacctgatgcagttgccagtggctatggaggca
gcaaccaacaaggatgaactgatcgcctatgaattaacaagaagggaagcagaagcaaac
agaagaccccttcctgagctagtgcgagccaagatacccttcagtgcctgccttcaggcc
ttttctgaaccagacaatgttgacgatttttggagcagtgccctacaagcaaagtctgcg
ggtgtgaaaacgtcccgctttgcctcgttccctgaatacttggtagtgcagataaagaag
ttcacttttggtcttgactgggttcccaaaaaatttgacgtttctattgacatgccagac
ctacttgacatcagccatctccgagccagggggttacagccaggagaggaggaacttccg
gacatcagccctcccatagtcatccccgatgactcaaaagatcggctgatgaaccaactg
atagacccctccgacatcgatgagtcgtcagtgatgcagctggctgagatgggcttccct
ctggaagcgtgtcggaaggctgtgtacttcactggaaacatgggagccgaggtggccttc
aactggatcattgttcacatggaagagccagattttgctgaaccactgaccatccctggt
tatggaggagcagcatctgctggagcctctgtatttggtgctactggattggacaaccag
cctccagaggaaatcgtagctatcatcacctctatgggattccagcgaaatcaggctgtg
caggctctacgagcaacaaataataacctggaaagagcactggactggatctttagccac
cctgagtttgaagaggacagtgacttcgtgatcgagatggagaataacgccaacgcaaac
attatttctgaggccaagcctgaaggacctagagtcaaggatggatctggaatgtatgaa
ttatttgcattcatcagtcacatgggaacatctacaatgagtggccattatgtttgccat
ataaagaaggaaggaagatgggtgatctacaatgaccacaaagtttgtgcctcagaaagg
cccccaaaagacctgggctacctgtacttttaccgcaggataccaagctaa
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