Sciurus carolinensis (gray squirrel): 124993141
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Entry
124993141 CDS
T08117
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00280
Valine, leucine and isoleucine degradation
ncar01100
Metabolic pathways
Module
ncar_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124993141
Enzymes [BR:
ncar01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
124993141
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RimK
ATP-grasp_3
ATPgrasp_ST
ATP-grasp_4
GARS_A
Ntox43
RnfC_N
Motif
Other DBs
NCBI-GeneID:
124993141
NCBI-ProteinID:
XP_047420716
EnsemblRapid:
ENSSCRG00010019942
LinkDB
All DBs
Position
9:complement(53361291..53422988)
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AA seq
725 aa
AA seq
DB search
MAAASVASVLLVAAERNRWQRLPVLLLPPRKWIWKQRTMKYGTTTGRNITKVLIANRGEI
ACRVMRTAKKMGVQSVAVYSEADRNSMHVDMADEAYFIGPAPCQESYLSMEKIIQVAKIS
AAQAIHPGYGFLSENVEFAELCKQEGIIFIGPPSSAIRDMGIKSTSKSIMAAAGVPVVEG
YHGEDQSDQGLREHAGRIGYPVMVKAVRGGGGKGMRIIRSEKEFQEQLESARREAKKSFN
DDAMLIEKFVDTPRHVEVQVFGDHHGNAVYLFERDCSVQRRHQKIIEEAPAPGIKPEVRQ
KLGEAAVRAAKAVNYVGAGTVEFIMDAKHNFYFMEMNTRLQVEHPVTEMITGTDLVEWQL
RIAAGEKIPLSQEEIPLQGHAFEARIYAEDPNNNFMPGAGPLVHLSTPQADLSTRIETGV
RQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRQYNIVGLCTNIDFLLRLSGHPEFE
AGNVHTDFIPQHHRELLPSQKAAAKEYLCQAALGLILKEKAMTEAFKLQTQDQFSPFSFS
SGRRLNISYTRNMTLRDGKKDVAIAVTYNHDGSYGMQIEDKTFQVLGDLYNEGDYTYLNC
SVNGVATKTKLIILENTIYLFSMEGSIEIGIPIPKYLSSSSSEGTQGGTIAPMTGTIEKV
FIKAGDKVKAGDSLMVMIAMKMEHTIKAPKDGTIKKVFYSEGSQASRHAPLVEFEEDDSD
KKESV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcctcggtagcgtcagtactgctggtggcggcggagaggaaccggtggcag
cgtctcccggtcctgctgctgccgccgaggaaatggatttggaagcaaagaaccatgaag
tatggaacaaccacaggaagaaacattaccaaggtcctcattgcaaacagaggagaaatt
gcctgcagggtgatgcgaacagccaaaaaaatgggtgtgcagtccgtggctgtttacagc
gaagctgacaggaattccatgcacgtagatatggcagatgaagcatatttcattggacca
gctccctgccaggagagctacctctctatggagaaaattattcaagtagccaagatctct
gctgcacaggctatccatccaggatatggttttctttctgaaaacgtggaatttgctgaa
ctttgtaagcaagaaggaattatttttataggtcctccttcctctgcaattagagacatg
ggcataaagagcacatccaagtccataatggccgcagccggggtgcccgttgtggaaggt
tatcacggtgaggaccagtctgaccagggcctgagagaacatgctggcagaatcggttat
cccgtcatggttaaagccgtccgcggtggaggaggaaaaggcatgaggatcattagatca
gaaaaagaatttcaggagcagttagagtcagcgcggagggaagctaagaagtcttttaat
gacgacgccatgctgattgagaagtttgtggacacgccaaggcatgtagaagtccaggta
tttggagatcaccatggcaatgcagtgtacttatttgaaagagactgtagcgtgcagagg
cgacatcagaagatcattgaggaagccccagcgcctggtattaaacctgaagtaagacaa
aagcttggagaagctgcagtcagagctgctaaagctgtaaattatgttggagcaggaact
gtggagtttattatggatgcaaaacacaatttctacttcatggagatgaatacaaggctg
caagtggaacatccggttacagagatgatcacaggaactgacttggtagagtggcagctt
aggattgcagcaggagaaaagattccattgagccaggaagaaatacctctgcaaggccat
gcctttgaggctagaatatatgcagaagatcctaacaataacttcatgccaggggctgga
ccactggtgcacctctctacccctcaggcggacctttccactaggattgaaactggagta
cggcaaggagatgaagtttcagtgcactatgatcccatgatcgcgaagctggttgtatgg
gctgcagatcgtcaggcggccttgacaaaactgagatatagccttcgtcagtacaatatt
gtgggactatgcaccaatatcgactttctattgcgcctgtctggccatccagagtttgaa
gccgggaatgtgcacactgattttattccccaacaccacagagaactgctgcccagtcag
aaggctgcagccaaagagtatttatgccaggcagctctgggtctcatcctcaaggagaaa
gctatgaccgaagctttcaaactccagacacaagatcaattctctccattttcattcagc
agtggaagaaggctaaacatctcatacaccagaaacatgactcttagagatggtaaaaaa
gatgtagcaatagctgttacatataaccatgatgggtcatatggcatgcagattgaggat
aaaactttccaagtccttggtgatctttataatgagggagactatacttacctgaactgt
tctgttaatggagttgctactaaaactaaactaattatcctggaaaacactatttaccta
ttttccatggaaggaagcatcgagatcggcattccaatacctaagtacttgtcttcatcg
agctcagaaggaactcagggaggtaccatagctcctatgactggaaccattgaaaaggtg
tttataaaagctggagacaaagtaaaagctggagattctctgatggttatgatcgccatg
aagatggagcataccataaaagctccaaaggatggcacaataaagaaagtgttctacagt
gaaggttcacaagccagcagacatgcgcctttagtagagtttgaggaagatgactctgat
aaaaaggaatcagtataa
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