Notothenia coriiceps (black rockcod): 104943601
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Entry
104943601 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104943601
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104943601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-RING_6
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Y1_Tnp
LMBR1
Motif
Other DBs
NCBI-GeneID:
104943601
NCBI-ProteinID:
XP_010767358
UniProt:
A0A6I9MVN5
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQQVSLGRETLSCSICLDVLKDPVTRGHSYCMRCIKDCWGKENEEKTYSCPQCRQSFTP
RPALVKSTRLAEFTEELKKVGLQDASPDLSIAKPGDVVCDFCSGVKLKAFKSCLMCMASF
CEQHLQPHFDVAPLKKHKLVAASSKLQENICSRHDEVMKIFCRTDQQCICYLCSMDDHKG
HDTVSAAAERADRQKELGVSREKVQQRAQDREKDVKALQQRVEAINRSADEAVRDSEKIF
TEFIHLIEKRSSEVKKIRSQQKTQVSQAQDLEEKLQQEVTELRRKDAELLQLSHTEDHLH
FLNNYPSLSRLSESEDLPSIDICPLRLFEDVTAAVSKTRDKLQGVVTEEWENISLAVTGV
DVLMTQAEPRTRAEFRKYSRQITLDPNTAHRRLSLSDGNRKATLMKGDQSYSAHPDRFVD
YFQVLSTEGLTGRCYWEVEWSGRAFIAVAYKNRTGKINQCRFGFKNKSWALDCISGGKYT
FYSNIPTHVSGPQSSRIGVYLDHRAGSLSYSSVFETMTLLHREQTTFTQPLHPGFRLPGK
DGDTVELCELK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagtgagtctgggtcgggaaacactgagctgttcgatctgtctggatgtt
ctaaaggatccggtaactcgtggacatagttattgcatgcgctgtattaaagactgctgg
ggtaaagagaatgaggagaaaacctatagctgcccacagtgcaggcagagcttcacaccg
aggcctgctctggtgaaaagtaccaggcttgcagagttcacggaggaactgaagaaagta
gggcttcaagatgcttcacctgatctttccattgcaaaacctggagatgtggtctgtgat
ttctgctccggggtgaagctgaaagccttcaagtcctgtctgatgtgtatggcctctttc
tgtgagcaacacctccaacctcactttgatgtagctccattaaagaaacacaagttggtt
gcagcctcctcaaagcttcaggagaacatctgctctcgtcatgacgaggtgatgaagatt
ttctgccgcactgatcagcagtgcatctgttatctctgctccatggatgaccacaaaggc
catgacaccgtctccgctgcagcagagagggctgacaggcagaaggagctcggggtgagc
cgggagaaagtccaacagagagcccaggacagagagaaagacgtcaaggcgcttcaacag
agggtggaggctatcaatcgctctgctgatgaagcagtgagggacagtgagaagatcttc
actgagttcattcatctcattgagaaaagaagctctgaggtgaagaagatcagatcccag
cagaaaacccaagtgagtcaagctcaagatctggaggagaagctgcagcaggaggtcact
gagctgcggaggaaagacgctgagctgctgcagctctctcacaccgaggaccacctgcat
ttcctaaacaactacccctcactgtcacgtctgagtgagtctgaagacttacccagcatc
gatatctgtcctctgcgcttatttgaggatgtgaccgcggcggtgtcaaagaccagagat
aaactgcagggtgttgtgactgaggagtgggaaaacatctctctggcagtgactggagtg
gatgttttaatgacccaagcagagcccagaaccagagctgaattcaggaaatattctcgt
caaatcacattggatccaaatacagcacacaggcggttgtcattgagtgacgggaacagg
aaagccacactaatgaaaggagatcagtcatattctgctcatccagacagatttgttgat
tattttcaggtcctgagtacagagggtctaactggacgttgttactgggaggtggagtgg
agcgggagagcttttatagcagtggcatacaagaacagaactgggaaaattaatcaatgt
agatttggattcaaaaacaaatcttgggcattagattgtatcagtggtggtaaatataca
ttctatagcaatattcctactcacgtctcaggccctcagtcctccagaataggagtgtac
ctggatcacagagcaggttctctctcttactccagcgtctttgaaaccatgaccctcctc
cacagagagcagaccaccttcactcagcctctccatcctgggtttcggcttccagggaaa
gatggtgacacagttgagttgtgtgagctgaagtag
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