Notothenia coriiceps (black rockcod): 104947976
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Entry
104947976 CDS
T04920
Symbol
phrf1
Name
(RefSeq) PHD and RING finger domain-containing protein 1 isoform X1
KO
K17586
PHD and RING finger domain-containing protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104947976 (phrf1)
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104947976 (phrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
PHD_2
Motif
Other DBs
NCBI-GeneID:
104947976
NCBI-ProteinID:
XP_010772413
UniProt:
A0A6I9NAQ9
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MDEDDSQEELINRSTSNSKGKRPALWAISDDSDSGEAESEEGESESGEEEEDDHLGGGDD
SDDDEEDDDEEEEEEEEDGNEEEDDEEEEGDAKAEDGALVGTSADPADMSSDEDADKCPI
CLNSFSSQPVATPENCEHYFCLDCILAWAKNANSCPVDRIAFNSIYLRKCYGGKVKKMIT
VQKPVKEGVQEVVDLDLEQTSCEACGGSDREDRLLLCDGCDSGYHMECLTPPLDSVPVEE
WFCPECEATNRRSRVSAEELSDTESLPSTARPATSRFQFGAAGPTRAIARTQQSERVRAN
VNRHRITQARSSQLAPTFLIQSTWLDDTINAVVAGLNTAVYIRDFTPRPPTTHRRKTRKR
RKVRRKTTSSAKSKTGKAATTGVKRRKRRVRRTKSRRRIVKKPATARSRIANTLRIVKDK
KGSSLPSVYRPAENTLSNMRADIGAASLSIHGDQYDLDPLSEREEVEQQARVTSLLEAKR
RGISRSALRSHQPVARPVTAGHSRRGMDVPQSAGFVEAAPVPDLLGSILSGQSVLLMNSC
DVVINRDGSLKATKSLMQSELNPGHSNDNSSGDASTQISPMMSPNQGDSSPSLPYNVDQP
GSSHSYTNRPLSQSSSHLPLHTPLQTGQIRPSSQLPLPIRPTHPHGHQRSNGAPSPSLST
KSKEMASSQSQKAPAKPMWVDVSVLPRIPKIKRESGDVTNNGTNQDVRDRSSSSSSSRGS
SSNSTTSRHGHSLPETGMNSLAGDRGRQQSVDQQKGRAEGQRQTPEGPGSSSAFSNSFSS
SSSSSMGSSASQSRYSSSASSSSSVSFRINTSGNTWQPRQVGSSSLPVAGSSTQPTRAQK
ENEAKKRQLHRDKQKLLASRTAVKQEESSDTIYDPFDPTLSDSSSSDNEAESARLHGSCQ
NATHEEKASSLVKKSQRQQDLVTVKTESQDIEVSQEEPMRADAQESTSQEVRFSETYVKV
ETKSRLIDMKSEKTTSLLASKVKIELGLVDAGGAEIIGSSVESEKTEDTSPPVQHRLDLF
KTKREEESAQRAVTPNTAPRDPSASSSTPIKKEQKPETKSDSKSSHKSRDLGQKKKTFQA
SKERRSKSPETDRGKRGDRQASGPGGRQKEKSSRRSRSRERTGAHSVSESSQSPVRKRPK
RQRSCSQSKERRRSRSGSGSSSRERSRKKKPLQRSKERSDGRDRDSDRGRESKDKRRGRG
RSRSRSKSRSRSVSRERKKGHTRLPQPSLSSKDKEDSRSKDKMRRRSRSSSREKRKEEGS
SSKSAQRTSGSRVSSSKDTKRSQDRKKAKDTPISSIIEEHVAPVIKQKTPSHTPASEMTK
KDPKVESQDTTAGKATEIKVEKEMKKEKRPSLDMFEDVFSISEQIKKEESDIHAFMVAKS
MDEKGKKEDPIKTEKCKIPIIKSEPSSPTLCHSPPPPLSSSLTTPVPADSLQDTVSDPEL
TASSEQPDSVKQEVQEPSDSDDDFNVDVMLDSLDYVKTERSEESGASVKQEGEEEEEEEG
KSEQISTVAKSKTQGKRVTWNIQEPDGPQPEKKSASKLSLYKLKLKQEGARRPSSTGQTS
SQVGQVSPTNS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgacagccaagaggagctgatcaaccgcagtacttccaacagcaaagga
aaaaggcctgcgttgtgggcaatctcagatgactcggacagtggggaagcggagtctgaa
gagggagaatctgagagtggtgaggaagaagaggatgatcatctaggtggaggggatgat
agtgatgatgatgaggaagatgatgatgaggaagaagaagaagaagaagaagatgggaat
gaagaggaagatgatgaggaagaagagggagacgctaaggctgaggatggagctttagtt
ggaacctctgctgatcctgccgacatgagctcggatgaagacgcagataaatgtcccatc
tgccttaactccttcagcagccagcctgtcgcaacaccagagaactgcgagcactacttc
tgcctcgactgcatccttgcatgggccaagaatgcaaactcgtgtcctgtggaccgtatt
gccttcaacagcatatacttaaggaaatgttatggaggcaaagtaaagaaaatgatcaca
gtacaaaagcctgtgaaggaaggagttcaggaagtagtagatttggacctggagcagacc
agctgtgaggcgtgtgggggcagtgaccgtgaggaccgcctcttgctctgcgatggctgt
gattctgggtatcacatggagtgcctcacgcctcctctggactctgttcctgtggaggaa
tggttctgcccagagtgtgaagccaccaaccgtcgctcaagggtttcagctgaagaactt
agcgacacagagagccttccctctaccgcccgtcctgccaccagtcgcttccagttcggt
gctgcaggtcccaccagagccatcgcccggacacaacagagcgagagggttcgcgctaat
gtcaaccgccaccgcatcacacaggcacgctcctcacagttggctcccacctttctcatc
cagtccacttggctcgatgacactattaacgctgtggtggctgggctcaacacggctgtg
tatatacgggacttcaccccccgccccccaactacccacaggcgcaagaccaggaagcgc
aggaaggtgcgaagaaagacgacatcttctgccaaaagtaaaacgggcaaagcagcaact
acaggagtgaagaggaggaaacggagagtgaggaggactaaatccagaagaaggatcgtg
aaaaagccagccactgctcgaagccgtattgctaatactctccgaattgtaaaggacaaa
aagggttcttcgcttccttcagtgtatcggccagcagagaacacgctaagcaacatgcgt
gctgacatcggtgctgcatctctctctatccacggggatcaatacgacctggatccatta
tcggaacgtgaggaggtggagcagcaggcccgcgtcacatcgctgttggaggccaagaga
cgagggatctctcgctctgctctgcgctctcaccagcctgtagctcgacccgtcactgca
ggccattccaggagaggtatggacgttccccaatcagcgggttttgttgaggcggctcct
gtgcccgacctcctgggaagcatcctatcaggacaaagcgtcctcttgatgaacagctgt
gatgtcgttatcaatcgagatggttcccttaaagcaacaaagtcattaatgcaatctgag
ttaaacccaggccacagcaacgacaacagctcaggagatgccagcacccagatcagccca
atgatgtcccccaaccaaggagacagttctccgtccctcccctacaatgtagaccaacca
ggatcctcccacagttacacgaacagacctctatcccagagctcctctcacttacccctc
cacacgcccctgcagaccggccagatccgaccatcttctcagcttcctcttccgatcaga
cccacgcacccccacggtcatcagagaagcaacggagcccccagcccctccctaagcacc
aagagcaaggagatggcttcatcacaatcccaaaaagcacccgcaaagcccatgtgggta
gatgtgtcagtgcttcctaggataccaaaaatcaaaagggagagcggtgatgtcacaaat
aatggcaccaatcaagatgtccgtgatcgtagcagcagcagcagtagtagtaggggaagc
agtagcaattccaccaccagtcgtcatggtcacagcctgccagaaacgggcatgaacagt
cttgctggggacaggggacggcagcaaagtgtagaccagcagaagggccgggccgagggt
cagaggcagacgcccgagggacctggctcttcctccgccttctccaactcgttctcctcc
tcttcctcctcctccatgggctcttctgccagccagtctcgttattcctcgtcggcatca
tcctcgtcatcggtgagtttccgcattaacacaagtgggaacacgtggcagccgaggcag
gtaggcagctcgtcacttcctgtcgctggaagcagtacgcagccgacccgggcacaaaag
gaaaacgaagccaaaaagagacagctgcacagagataaacagaagctgctggcatcgcgt
acagcggtcaaacaggaagaaagcagcgatactatctacgatccttttgatcccactctg
tcagactcgagcagctcagacaacgaagctgagagcgcaagactgcatggaagctgccag
aatgcaacacatgaggagaaagcttctagtttagtaaagaagagtcaaaggcagcaggac
ctggtgactgtcaaaaccgaatcacaggacattgaggtctcacaggaagaaccaatgaga
gctgacgctcaggaatccacatcccaggaagtcagattctcagaaacatatgtcaaggta
gaaacaaaatcaagactaatagatatgaagtctgagaaaacaacatcgttactagcctct
aaagttaagatagaactagggttggttgatgcagggggagctgaaataattggtagcagc
gttgaaagtgaaaagacagaagacacctcaccacctgtccaacacagactggatctcttc
aagactaagagagaagaggagagtgcacagagggctgtcactcctaacactgctcctcga
gatccatcagcatctagctctactcccattaagaaggaacaaaagccggaaactaaatct
gactctaagtcctctcacaagtcaagagatttgggccaaaagaagaagaccttccaagct
tcgaaggagaggcgctctaaaagtccagagacagaccgagggaagaggggagaccgccag
gcatcaggcccaggaggcagacaaaaggaaaagagttccagacggtccaggtccagagag
aggactggtgcacactcagtctctgaaagctctcagtcccctgtgaggaaacgcccaaag
agacagcgatcctgctcccaatccaaagagaggaggagatctaggtctggttctggatct
agcagcagagagcgttccagaaagaagaagcctttacaaaggagcaaggagagaagtgat
ggcagagatcgagacagtgacagaggccgagagtcgaaggacaagagacgcggtcggggt
cgctcacgttcacggtcgaaatcacggtccagatccgtatccagggaacggaagaagggt
cacacacgactgccacagccatcgctctcctccaaagacaaggaggactctcgatcaaaa
gacaagatgagacgcaggtccagatccagctcaagagagaaaaggaaagaagaagggtct
tcatccaagagcgctcagaggacttcagggtcccgcgtttcgtcctctaaagacacgaaa
cgctcacaagacaggaaaaaagcaaaggatacacctataagttccatcatagaggaacac
gttgccccagtgatcaaacaaaagactccctcccatactcctgcctctgaaatgacaaag
aaagaccctaaggtagagagccaggacacaacggcgggaaaagctacagagatcaaggtt
gaaaaagaaatgaagaaagaaaagcgaccatctcttgatatgtttgaagatgtgttttct
attagtgaacagattaagaaagaagaatctgacatccatgctttcatggtggccaaaagc
atggatgagaaggggaaaaaagaagaccccatcaagacggagaagtgtaaaatccccatt
attaaatctgagccaagttcccctacattatgccattcaccccctccccccttatcctcc
tcactgaccacacctgtcccagcagacagtctccaggatacagtgtctgacccagagtta
acggcctccagtgaacaaccagactctgtgaagcaggaagtccaggagccctcggactct
gatgatgactttaatgtcgatgtgatgctggacagcctggactatgtgaagacggagcgc
tcagaggagagcggtgcatccgtcaaacaggagggggaggaggaggaggaggaggagggg
aagagcgaacagatatcgaccgtagccaaatccaagactcaggggaagagggtcacctgg
aatatacaggagcctgatgggcctcaaccagaaaagaagtctgcaagcaagctgtctctg
tataaactgaagctgaagcaggaaggggctcgcagaccctcctcaacaggccagacatct
agtcaggtaggacaggtatcacctactaacagttaa
DBGET
integrated database retrieval system
