Notothenia coriiceps (black rockcod): 104948564
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Entry
104948564 CDS
T04920
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104948564
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GFIT
Motif
Pfam:
Cadherin_3
Lectin_C
Calx-beta
Cadherin_4
Big_9
Chordopox_A33R
UL45
Motif
Other DBs
NCBI-GeneID:
104948564
NCBI-ProteinID:
XP_010773067
UniProt:
A0A6I9N958
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MTRDLPQLRPSLPVYDLKVTVFPVDSQTPSLATGDIFSVDEGGSAPITASHLKASDVDTV
LDQLVLSLISPPQFGYIENVLPSPGFEKSNTGISIASFSYQDILDGHINYVQSRHQRMEP
TADQFLLCISDGKHSSAHVPFYIIINPTNDEIPQFVARNITVREGEMKQLDMSVLHALDL
DVPQDILLFSVVKPPHHGSIITLSSERKIYKRQEAAHQSPVVDFSMTDLSNGMDLMYMHD
DSENMEDSFTLQLTDGRHQLQRRVVVMVLPLNDEEPRVVRNNGLEVEPGESRLISSATLL
AQDEDTPPSEVLYMLENVPTQGLLQLKEGEDWKTLTAVRNCSQEMVDMNLLRYMHTGLHG
AHTQDFFVFYLLDGKNQSPLQHFHISVKDLEKGNIAMFVKPLKVSRGDRVVLTTDVLLAT
DGTEKPEELLFIITHPPAHGHMEYIKHPGLAISTFSQMDVAANLVAYVHDNRATTPRESF
QFVVSNGRTSRNGSFEMLVEMVDRILPSLSSNKGLSAPQGSSMILGPDCLILSDPDTPPR
ALTFELVQAPQYGRLLLAGSTLTAGSNFTQRDIQELEVTYKHDGGPSQIDRFAFTASDTT
RRGFLLEGRLHTEPVFFTIQIKPLDNTYPEVVKLIPLWKAEPLGDGRHGIFVSSRELKAQ
DRDSRDDELIVSIVRQPYFGYLENMTTGGFVPHRFSQTELSKRTIAYIINPHRESLTDSL
EFTVSDPLGNTGPPHILKFSWSTVELSQPEYSVSEEHRTLSLDIIRKGNLAESSYITVKV
EEVSATAGTDFLISPSSLIQFDPGVSKRSWQTEIIQDHLEEAVEIFEVLLVSPEGSVIGS
INKAQVQIRDSGRRQTWLNQDPKAPVLVGKEIGSDTYPQHGSIHLEKLPLGTESIIWGRG
DSLSRPAADRPRKKLKVLDNPKSITPSSVFHNGTDTVYTYHGIMQMQVEDDTTPSRKGRK
ANIRVVSRGAQQQGPAVFTKSKSDPKTKISKPQKTAAEGPADNSVPKPCVPELIGVLYLN
QTTNQLFHCNGISWKPWAPNDQMSGQKCPQGWTFHSGHCYSLSTEHKVTWSAANRACRER
YKSTLASVLSKLDMDWLWDFGGRKPFWIGLNDREGRGRWEWAGGEPLNYTSWRKTPPPSK
IKGNKNCILVGRRAKWQIRDCKTGRGHRFVCSKRT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaccagagacttgcctcagctgcgacccagtctgcctgtttacgatctcaaggtcacc
gtgtttccagtcgacagccaaacaccttctctggcaacaggagacatcttttctgtagat
gagggggggtctgcccctatcactgcttctcatctgaaggcctctgacgtggacactgtt
ctggaccaactggtgctcagtctgatttcccccccccagtttggctacattgaaaatgtc
ctgcctagtcctggctttgagaaaagcaacacaggcataagcatagcttccttttcctac
caagatatcctggacggccatattaactacgtccagtccaggcatcagaggatggagccc
acagccgaccagttcctgctctgtatatcagacggaaaacacagctctgcccacgtcccc
ttctacatcatcatcaaccccaccaacgatgagatcccacagtttgtggctcggaacatc
acagtacgagaaggagaaatgaagcagttggacatgtcagttctacatgcgttggatctg
gacgttcctcaggacattctgctcttcagtgtggtcaaacccccccaccacggcagcatc
atcaccctcagcagtgagaggaagatctacaagagacaagaggccgctcatcagtcccct
gtggtcgacttctcaatgacagatctctctaatggtatggatctgatgtacatgcacgac
gactcagagaacatggaggatagtttcaccctccagctgacggatggcaggcaccagctc
cagaggcgagtggtggtgatggtgctgccgctcaacgacgaggagcctcgcgtcgtccgg
aacaacggcctggaggtggagccaggagagagccggctcatctccagtgccactctgtta
gctcaggacgaggacacgcctccttctgaggtcctgtacatgctggaaaatgttcccacc
cagggactgcttcagctgaaggaaggtgaggactggaagaccctgacggcggtgaggaac
tgcagccaggagatggtggacatgaacctcctgcgctacatgcacaccggcctgcacggc
gctcacacacaggacttctttgtcttctacttgttggatgggaagaatcaatcaccccta
cagcacttccacatctctgtcaaagatctggagaaaggaaatattgccatgtttgtgaag
cctttgaaggtcagccgtggcgatcgagtggttctcaccacagacgtgctgttagccaca
gacggcacagagaagccagaggagcttctgttcatcatcacccaccctcctgctcacgga
cacatggagtacatcaaacatccgggactggccatctccaccttcagccagatggatgta
gcagccaaccttgtggcttacgtgcatgacaaccgagcaaccacccccagagagagcttt
cagttcgttgtgagtaacggtagaaccagccggaatggaagctttgagatgttggtggag
atggtggatcgcatcctaccctctctgtcctcaaacaaaggcctctcagctccacaaggc
tcctccatgatcctgggtccagactgcctgatcctgtccgaccccgacactcccccgcgt
gccctgacctttgaactggttcaggctccacagtacggcaggctgcttctagctggttcc
acgctgactgcaggttcaaacttcacccagagggacatccaggagctggaggtgacctat
aaacacgacggggggccatcccagatcgaccgcttcgccttcactgcctctgacaccacc
aggcggggcttcctgctggaggggaggctacacactgaacctgtgttcttcactattcag
atcaagcctttggacaatacctatcctgaggttgtgaagctgatccctctttggaaagca
gagcctcttggcgacggacgacacgggatctttgtgtcgtctcgtgagctgaaggcccag
gacagagacagcagagacgacgagctgatagtcagcatcgtgcgccagccgtactttgga
tacctagaaaacatgactacaggtggttttgtaccacatcgcttctctcagacggagctg
agtaaaaggacgatcgcctacatcatcaacccccacagggagtcccttacagacagcctg
gagttcacagtgtccgatcctctagggaacactgggccccctcacatactgaagttcagc
tggtccacggtggagctgtctcagcctgagtactctgtcagtgaggagcacagaactctt
tcgctggacatcatccgaaaaggaaacctggcagagtcttcatatatcactgtcaaggtg
gaggaagtgagtgcaacagctggaacagatttcctcataagcccctcttccctcattcag
tttgatccaggagtatcaaagaggagctggcaaactgagattatccaggaccacctggag
gaggcggtggagatatttgaagtgctgctggtgtcccctgaaggctcggtgatcggcagc
atcaacaaggctcaggtccaaatcagagactcgggaagaagacagacctggctgaaccag
gatccaaaggctcctgttctggtaggaaaagagattggatcagacacctacccccagcat
ggatccattcatctggagaaactgcccctgggaacagaatcaatcatctggggccgtgga
gacagtttatccaggcctgctgcagatcggccaaggaagaaactcaaagttctggacaat
ccaaaatctattaccccatcgtcagtgttccacaacgggacagacactgtttacacgtat
catggcatcatgcaaatgcaagtagaggacgacaccaccccgtcaaggaagggaagaaag
gcaaacatccgtgtggttagcagaggagcacagcagcaggggccagctgtgtttactaag
tccaaatcagatcctaaaacaaagatctctaaacctcaaaaaacagcagctgaaggacca
gctgataactctgtacccaagccctgtgtaccagaactgattggagtcctgtatttaaac
cagactaccaatcagctgtttcactgcaacggtatctcctggaaaccctgggcaccaaat
gatcagatgagtggtcagaagtgtcctcagggctggacctttcacagtggccactgctac
agcctcagcactgagcacaaggtcacatggagcgcagccaacagggcctgcagggagaga
tataaaagcactctagcaagcgttctctctaaattggacatggactggctttgggacttt
ggaggaaggaaaccattttggattggccttaatgacagggaaggccgagggcgctgggag
tgggcggggggagagccgctcaactacaccagctggagaaagaccccccctccgtccaaa
attaagggaaacaaaaactgcatcctggtggggagaagggcaaagtggcagatcagggac
tgcaagacgggcagaggtcatcgctttgtgtgctccaaaagaacttga
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