Notothenia coriiceps (black rockcod): 104950005
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Entry
104950005 CDS
T04920
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104950005
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104950005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
Prok-RING_4
MRP-S31
Nop16
U-box
Motif
Other DBs
NCBI-GeneID:
104950005
NCBI-ProteinID:
XP_010774742
UniProt:
A0A6I9NDV9
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQKGVQLEREMLSCSICLDLLKDPVTTSCGHSYCMKCLKGCWDGEDEKKVYSCPQCRQR
FTPRPVLLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLVCL
ASYCDQHLQPHYESPVLKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQSICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSAEKVVEDSE
KTFTELIRLMEERSSDVKQQLRSQQKREVSRVRELQEKLKQEISELKRRDAELKLLSHTE
DHNQFLKNYSSLSQLSDSTALPNIHPLQYFGDVATAVSEVRDKLQEVLMENWSKILRTVT
EVETLLSHQLTTREDFLRYACHITLDPKTAHPWMLLSEGNRKVTNMEVSVPKKHAGFNHT
YQVLSKESLTGRCYWEVKWDAVITIAVTYKDGSNSGPYHEFAFGFNDKSWGLVSRWDYVG
VIHNRKFTQISGDSSLRVGVYLDHKAGILSFYDVGETMKLLHTVQTTFTQPLYAGISLRL
PKGDNATVCQL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggagcgggaaatgttatcttgttccatctgtctggat
ctactgaaggatccggtgaccacttcctgtggacacagctactgcatgaagtgtctaaaa
ggctgctgggacggagaggatgagaagaaggtctacagctgccctcagtgtaggcagcgc
ttcacaccgaggcctgtcctgctgaaaaacaccatgctagcagctttagtggaggagctg
aagaagactggacccccgcctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgcaagtcctgcctcgtgtgtctg
gcctcttactgtgaccaacacctccagcctcattatgaatcacctgtcttaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagctgttctgccgcactgatcagcagagtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgagaaagtagtggaggacagtgag
aagacgttcactgagctgatccgtctcatggaggaaagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagagaagtgagtcgagtcagagagctccaggagaagctgaag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagttcttaaagaattactcctcgctctcacaactcagtgactccacagca
ttacccaacatccatcctctgcagtactttggcgacgtggcaacagctgtgtcagaagtc
cgagataaactacaggaagttctgatggagaactggtcaaagattttacggacagtcact
gaagtggaaactttactttcacatcaactgacgaccagagaggatttcttacggtatgca
tgtcatataacactggatccaaagacggcacacccctggatgttattgtctgaggggaac
cgtaaagtaaccaatatggaagtctcagttcctaaaaaacacgccggattcaatcacact
taccaggtcctgagtaaagagagtctgactggacgttgttactgggaggtgaagtgggat
gcagtcatcaccatagctgttacatacaaggatgggagcaattcagggccctatcatgaa
tttgcatttggatttaatgacaagtcctgggggttagtcagtcgctgggattacgttggt
gtcatacataacagaaaattcactcagatttcaggtgactcctccctcagagtaggagtg
tacctggatcataaggctggcattctgtccttttacgacgtgggggaaaccatgaaactc
cttcatactgtgcagaccactttcactcagccgctctacgctggaatttctcttagatta
ccaaaaggagacaatgccacggtgtgtcagttgtag
DBGET
integrated database retrieval system
