Notothenia coriiceps (black rockcod): 104951722
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Entry
104951722 CDS
T04920
Name
(RefSeq) uncharacterized protein LOC104951722
Organism
ncc
Notothenia coriiceps (black rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC
TFIIS_M
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
104951722
NCBI-ProteinID:
XP_010776755
UniProt:
A0A6I9NPS7
LinkDB
All DBs
Position
Unknown
AA seq
3181 aa
AA seq
DB search
MDPMEDNDIINDYNDEEQPEEAGSSVRPTMSQVKKSWGFRRTTIAKREFLDEVGDLTSNP
QPVRRARGRRANPTPQPSPETQRVSRGTRSVIDDLEWSAPSSPVSEESKPASAASAGGSL
DPSSWQDCGSAFHTAFSLLGGGEGLALDMSDTLAIPDILEVTDSLEASPPQLIEETEVPD
DNESADEMEISQPVAPDNVAGGENDDVVLISSQEEDSDDMSLMQMKEQIASKGRQGDTRG
RGGRGGRGKARGRGRGRGRGRGRGRGRGRGRSKAVALQSRIIDEEDNHNELVVVNPADQM
LQQFQDEDKENDPQDPAEIVISPANSDITLSPTQQSSSDYIIIDTDLDHITDMTSGQYAD
APEEEEMEEKKEYTDVEEFPRILDTDGSDSNALYCICRQKQDKRFMICCDICQDWFHGDC
VGISATQGRKMEKKGQEYVCPPCTTRKQIQLQPEPQPEPELSFPECLTLSPPSEEQEQHQ
EQKDLKETLSAVEEEEQQQQQQQQQQQQQQEKEKEKEEKAPVMMSKLEPDAEMETGSSLP
LCIGPECSKQALQDSVYCGTDCILQHAAFTMKTLSVPKVPKPRGRPQRKAATAKPNPTGQ
RLGRMSKRLEVNAEEREEEDVKEDDGGQEEAVSHLACDPSLTEVQTTSIPSSKFYTASIK
DNEQVEADSEVATSTKPPADETSTDVAPSSQPAAETPSTQSHSEEQTKQPTNSAVPQQQS
AYSDPSIPPNPTKTSVPPAPQSPSTSAPRHHETGALMVTKTAYVIPKKHPAPQAPPSHLS
ASTSGQKPSSAPTLMNETRNLLVPPAPSAPSSRPSQPNTQVRQSIQRSLISILFKRVCDC
EDLEMSESDIAKLVSSIETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVRGEI
SPFRLARMSQKDMQATKASEPSAKETTEVKNAAAKATSLPQKPEAVKVDLPSLNPTRPAR
STFAFQEQKKNLPALAPKTRTSQPNQGSAVPDILSCMLKDTTSEHKAHLFDLKCKICTGQ
MFVGEDEEPAKKKPKISETRDKYERSWRKCAGDDSPLRAPPDSPDMDSPTSLMDYSPRLI
IDAPALIIVESPASPIMDSPASPVMESPASPTPDTPKTTTQQRSYTPVVIPAVSTVTITR
RDPRTAANRSSSSRGTSSPSNTTNNQSASYSIRQETTSASPSAPTHLGPPTKPLPKSILM
KPSSSADPRLYGTSSRTVISESPADGETSQFLAKHEIVWKGFLNMLSVAKFVTKGYMVSG
TAENLKADLPDTIQIAGRILPQTVWDYVAKLKTSVTKELCVIRFHPATEEEEVAYVSLFS
YFNSRGRYGVVANGSRSIKDIYLVPLSAKESIPTILQPLDGPGFEKNRPNLLLGLAVIQK
TKRPGSLPQEIEEKRPKVNMSKDPMWIPKPPVLYGSDKLEIFQPYDPETPANTSPPGSPL
CPGSPSDSSSSGSVALPSCYNSFRTNPPFSTSAAVAATQSTSESDKNATAASSNKSPLQT
ILKSLFGNKQTDSVVSSDVQSSTATVHVKKVPVFSKVSRSMVDPIVQQYGQKSKVKKIEE
EDENDFDRPYDPEEEYDSAMGYGMVAPQNIEKMKAEGPAVSGCVDDDVAYDPEDDTIFAD
MQRDIAVTKPPAQTQTSGTPSCQTPISTQIKTPTPNSTAVQSSTQAVIMQNIPTGTVVVS
AATLTEQQRMLEDLNRQIEEQKQQLKEQEEALRQQREAVGIFMARFSVSDSLMSPPQKAL
PLSRLSESTDKTSNLTETEDSSNVDSQTVKQDTTATPNVEKDAETVTEQDKTQADVKESD
KYSSAGEIEDSDVAYDPEDESLFDEFQDDVFQGGSIKTRDLSLSRTGHSASRKGSPLSSH
HSRKRKLSPKRRSHHERSRHGSPSKRSQRRSPSHSRRHREKDRHRKSERDRSRHRARDQS
DRQGRQRKEHTPRQHSHGRRRSPCSPRKTDSGSISPKWNRDPSPQILEISKPLTVLCNAP
DSLDSVDGTFLESNQSSSSSVTIQNYPPVGHQLKSNLVKSVDEGFSPSSHELLHNFKLNT
LKDPKSQEPQNTSVSGDTDSGSSNQVNIPSQLETLFSKFEIPVPLRETDPPLRDSPQSPD
PEPQFVKPIRTEKRGPTIEEIRDPQTLTSVSMPHDKVVSICLPIGGQATMSKILWPTGRG
ALVLEGQRFKDDVINEADKQIEMGHPGLKHPKILGQGEGDSIRAISSDIQASGTEKDPVT
KQPGPGHIEPQIDLRVTETGFPGPNRRGPDMQGKGTTIWGPGSHTQNVSSMQGLNLELTA
PAPDMMHSETEVSGQMLVPAVINSCGEGSDLQNKSRDLVIKSPSSHRTEADIRGTREPLF
AHERWGPQKGQNVPMRGPGPNINYESGGSNIPFFGEDSGPREPFKKTSPGMTAGKSMHGT
DMKESETICELRRPNMTQRGSYMGPSQDIGSMGGSDTRGDGMLNIKTPDWSGPGPVADPD
IRGQTSQNIGLGLHMRGIDCGDPGTVIRDDCRGTDMRGSGPLREGPFIQDEWRVPPPNSR
GPHLENQVPNRRGVGDLDFRGPASEMSCGLIEDIRPDRKRSVGPNFMAPGGPEFVRPGLE
MNDQDRMGHGPNRRGPGGPDVRGPGPVSRGLSMEGPGPDRRGPGGPDFRGPGHERRGPAM
EGPGPDRRGPGGPDFQGPGTERRGPAMEGPGPDRREPRGLDYRVPGPERSGRAFDGPGPD
WKGPGGPDFRGTGAERRGPAMEGPGPDGRGPVGPDFIDLGTGKKSPAMDAPRPDRGPGCP
DFRGPRPESRGFPMEGNGPDRRGPGGPVFRGPRPERRSLSMERFGPDRRGTSGQDFREPE
PERRGPAMEGPGPDMRVPGGPDFKGPGPEIRSLSMEGPGRDKRGPQGPNFRVPWSECRDL
SMEGPGPDRRGTRGPGFREPGPERRSLSMEAPGPGRRGPGGPDFSGPGSNIRGPGITGLG
PYTGEPEVPDFSGPGIEGPGPRVRGQEVVPDGPHFRRPGSERRSSSLERPGPDIRGPGSP
DFREPGLLTRNQAMEGSGPDMRGPGAPNNRGRQGFGMEGPDFNRTMSDGPDMRKPGHSDP
NKESPRPERREGQHFRGRGPNRRLPETEENSESRDFPGGQHFRAPELERRPSDIVGPGSD
RRNPYSRGGLTDKYQEIQASKSLDLKRGVQILRAKDQIGEDQVVMTLGTQESGTEVQKEK
V
NT seq
9546 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggaagataatgacatcatcaatgattataatgatgaagaacagccagaa
gaggctggttcgagtgttaggccaaccatgtctcaggttaaaaagtcctggggcttcaga
cggacaacaatcgccaaaagagagttcttggatgaagttggagacctaacaagcaatcct
caacccgtacgcagagccagaggtcgtagagccaacccaacaccccagccctctccagaa
acccagagagtttcccgtggaaccaggagtgtaatagatgatctcgagtggtctgcccca
tcgtcaccagtatcagaggagagcaagcccgcctccgcagcctcagcaggagggagcctt
gaccccagctcgtggcaagattgcgggtctgccttccacactgctttctcactgcttggt
ggaggtgagggtttggcactggacatgtcagacacactggcaatccctgacattttggaa
gtcactgactcccttgaagcctcgccaccccaactcatagaagaaacggaggtgcctgat
gataatgaatctgctgatgagatggaaatctcgcagcctgttgcacctgacaatgtggca
ggaggagaaaatgatgacgttgttctgatatctagtcaggaagaggacagtgatgatatg
tctctgatgcagatgaaggagcagatagcttcaaaaggcagacagggagacacaagaggt
agaggggggagaggtggaagaggaaaggccagaggaagggggagaggcagaggaagaggt
aggggaagaggcagaggacggggcagagggagaagcaaggcagtggcgcttcaatcaagg
attattgatgaagaggacaaccacaatgagctggtggtagttaaccccgctgatcagatg
ctgcagcaatttcaagacgaagacaaagaaaatgatccacaagatcctgctgaaatagtg
atatcccctgctaactctgacatcactctgagtcccactcagcaatctagctcagactac
ataatcatagacactgatttagaccacattactgatatgacttctggccagtacgctgat
gccccagaagaggaggagatggaggagaagaaagaatatactgacgtagaagagtttcca
cgaatattagatacagacggctctgattccaatgctctgtactgcatctgtcggcagaag
caagataaaaggttcatgatctgctgtgacatttgccaggattggtttcatggcgactgt
gttggtatcagtgcaacacagggtcgtaagatggagaagaaagggcaagagtacgtgtgc
cccccttgtactacaaggaagcagatccaactccaaccagagcctcagccagagcctgag
cttagctttcccgaatgcttgacgctaagtccacccagtgaagaacaggagcagcaccag
gagcagaaagatctcaaggagactttgtctgcggttgaggaggaggagcagcagcagcag
cagcagcagcagcagcagcagcagcagcaggagaaggagaaggagaaggaggagaaggct
cctgtgatgatgtcaaagcttgagcccgatgctgagatggagacaggcagctctcttcct
ctgtgcattggacccgaatgctccaaacaagccctacaagactctgtttactgtggcact
gactgcatcctgcagcatgccgccttcactatgaagactctttctgttcctaaagtgccc
aagcccagaggacggcctcagagaaaagctgccactgccaaacccaacccaacgggtcag
aggttgggtcggatgtcaaagagattagaagtaaatgctgaggaacgtgaagaggaggat
gtgaaggaagatgatggagggcaggaggaggctgtgtctcacttagcctgcgaccccagt
ctcacagaagttcagaccacttccataccatcgtctaagttttacacagcgtctataaag
gacaatgaacaggtagaggcagacagtgaggttgcaacttctaccaaaccacctgcagat
gagacctcgactgatgttgccccctcttcccagcctgccgctgagacaccatcgacacag
agccactctgaagaacagacaaagcagccaaccaacagtgcagtgcctcagcagcaatct
gcatattcagatccctctataccaccaaacccaacaaaaacgagtgtacctcctgcccca
caatccccctccacctcagctcccagacatcatgaaacaggggctcttatggtcactaag
accgcgtacgtcataccaaagaagcaccctgccccccaggctccacccagccacctgtca
gcctcgacgtcgggccaaaagccttcttctgccccaacgctgatgaacgaaaccagaaat
ctgctggtgccccctgcacccagtgctccctcctccagaccctcccagcccaatacccaa
gtcagacagagcatccagcgctccctcatcagcatcctgttcaaaagggtgtgcgattgt
gaggacttggagatgtccgagagtgacatagcaaagcttgtctcaagcattgagacggag
atgttcgacatatttcgcaacacagacagcaaatacatgaacaagtacagaactattatg
ttcaacctgaaagacccaaaaaacaagggcttgttgtatcgtgtcgtacgtggagagatc
agtcccttcagactggccagaatgagccagaaggatatgcaggctaccaaagcatcagag
ccaagtgcaaaagaaactacagaggttaagaatgcagctgctaaagcgacaagtttgccg
caaaagcctgaggcagtgaaggtggatttgcccagtttgaatcccactagacctgctaga
agcacgtttgcgttccaggaacaaaagaaaaaccttcctgctcttgctcccaagaccaga
acaagccagccgaaccagggcagtgctgtaccagatattctctcctgcatgctgaaggac
acaacatcagagcacaaagctcatctctttgacctgaaatgcaaaatatgcacaggtcaa
atgttcgttggggaagacgaggaaccggcaaagaaaaaacccaagatttctgagacaaga
gataaatatgaacgctcttggagaaagtgtgccggagatgactctcctctgagggcccca
cctgactcacctgacatggattctccaacatcccttatggattattcaccccgtcttatc
attgacgctccagcgctgattatcgttgaatccccagcgtcccctataatggactctcca
gcctcccctgtcatggaatcccctgcttccccaactccagacactcctaaaactaccaca
caacagagatcctacacaccagttgtgatcccagcagtctctacagttactatcacaagg
cgtgacccccgcactgccgcaaacaggtcttcttcgtctagaggcacatccagtccaagt
aacacaaccaataaccaatcagcatcttattctattcgtcaagagactacctctgcgtcg
ccctcagcaccaacgcacttgggaccaccaacaaaaccattacccaagtcgatcttaatg
aagccatcatcctctgctgatcccagactctatgggacatcctcaaggactgtgatctct
gaatccccagctgatggtgaaacttcccagttcttggctaagcatgagatagtgtggaaa
ggcttcctaaacatgctctctgtggccaagtttgtcaccaaaggatatatggtttcagga
acggctgaaaatctcaaagcggatctacctgataccatacaaatagcaggacgaatcctg
cctcaaacagtgtgggactatgttgcaaaactaaagacctctgttacaaaggagttatgt
gtgatccggtttcaccctgcaaccgaggaggaagaggtggcctatgtctccctattttcc
tacttcaacagcagaggtcgttatggtgtggtcgccaatggcagccgttccatcaaagat
atataccttgtcccactaagtgcaaaggaatcaatcccaaccatactccaacctcttgac
ggaccaggttttgaaaaaaaccggccaaatcttcttctgggtctggctgtcatccaaaag
acaaaacgtccaggaagcttgcctcaggaaattgaagagaagagacccaaagtgaatatg
tccaaagaccctatgtggatcccaaaacccccagtcctctatggttctgacaaattggaa
atatttcaaccctacgatcctgagactcctgctaacacctcccctcctggctcaccactt
tgccctgggtcaccatcagactcgtcctcttctgggtcagttgccctaccatcttgttat
aattcttttagaacaaaccctcctttctctacctcagctgcagttgctgccacccagtcc
acctctgagagcgacaaaaatgccacagcagcatccagtaataagtcaccactgcagacc
atcttgaaaagtttgtttggcaataagcaaactgactccgttgtctcttctgacgtacaa
tcttcaactgcaacagttcatgttaagaaggtcccagtgttttctaaggtgtctcgatca
atggtggatccaattgtccaacaatatggacagaaatcaaaagtaaaaaaaatagaagaa
gaagacgaaaatgactttgaccgaccatatgacccagaagaggagtatgattcagcaatg
ggatatggaatggttgctcctcagaacattgagaaaatgaaggcagagggtcctgcagta
tcaggctgtgtagacgatgatgtggcctatgatccagaagacgacactatctttgcagat
atgcaaagggatattgctgtgacaaagccccctgctcaaactcaaacgtcaggtactcca
tcatgccaaaccccaatatccacccagattaaaacaccaactcccaactccactgccgtg
caatcctctacccaagctgtaataatgcagaacattcctacaggcactgtggttgtctca
gctgcaacactaactgaacaacaacgaatgcttgaggatctcaataggcagattgaagag
caaaaacagcaattgaaggagcaggaagaggccctacgtcaacagagagaggctgttggt
atctttatggctcgcttttctgtttctgattccctgatgtctcccccacaaaaagctttg
cctctcagtcgactgtcagaatcaacagacaagaccagcaaccttacagagactgaggac
agttcaaatgtagattcacaaactgttaaacaagacacaactgccacacctaatgtagaa
aaggatgcagaaacagttacagagcaagataaaacacaggctgatgttaaagaaagtgac
aaatattcctctgcgggtgagattgaagactctgatgtagcttatgatcctgaagatgaa
tcactttttgatgaatttcaagatgatgtttttcaaggaggcagtataaagacccgtgat
ttatctttgtcgagaacagggcatagtgcctctcgcaagggcagtcctctgagttcacac
catagcagaaagagaaagttatcaccaaagaggcggagtcatcatgaaaggagccgccat
ggaagtccttctaaaagatcacagcgacgttctccttcacattcccggagacatagagaa
aaggatagacacagaaaaagtgaaagggacaggtcaaggcatagagcaagagaccagtct
gaccgccaaggtcgccaacgtaaagagcataccccacggcagcattctcatgggcgtaga
agatccccatgttctcctagaaaaacagattctgggtccatatcgccaaaatggaacaga
gatccttcacctcaaatccttgagatatcaaagcctttaactgttctgtgtaatgctcca
gactctttagactctgttgatggaacatttttagagagtaaccaatcatcatccagttca
gttactattcaaaattaccctcctgttggacatcagctaaaaagtaatcttgttaagagt
gttgatgaaggcttttctccctcttcacatgaacttcttcacaatttcaagcttaatact
ttaaaagatccaaagtcccaagagcctcaaaacacgtctgtcagtggcgacacagatagt
ggttcctctaaccaggtgaatataccctctcaacttgaaactctgtttagcaaatttgaa
attccagttcctctacgtgaaacggatccgccccttagagattctcctcagagccctgat
ccagagccacagtttgtaaaacctattcgcacagaaaagaggggccctacaattgaggaa
atcagagatcctcagacccttaccagtgtctcaatgccacatgataaagttgttagtatt
tgtttgcctattggtggtcaagcaacaatgtccaaaatactgtggccaaccggtcgaggt
gccttagttctagagggacaaaggttcaaagatgatgttataaatgaggcagacaaacag
atagaaatgggacatccaggcttaaaacatcctaaaatactgggtcaaggggagggggat
tcaattcgagctataagctcagatattcaggcctcaggaactgaaaaagatcctgtgaca
aaacagccaggacctggacatattgaaccacagatagatcttagagtaacagaaactgga
ttcccaggccccaataggagaggcccagacatgcaaggaaaaggtaccaccatttggggt
cctggatcacatacacaaaacgtatctagtatgcaaggcttgaacctagaactcacagct
ccagctcctgatatgatgcacagtgaaacagaagtgagtggacaaatgcttgtaccagct
gttataaattcatgtggggaaggatcagatctacagaacaagagtagagatctagtcata
aagagcccttcgtcacatagaactgaagctgatataaggggcacaagagagcctttattt
gctcatgagaggtggggtccacaaaaagggcaaaatgtacccatgagaggaccagggcca
aacattaattatgaaagtggtggttctaacatacccttctttggagaagacagtgggcct
agagaaccttttaagaagacaagtcccggtatgacagctggaaagagtatgcatggcact
gacatgaaagaatcagaaactatttgtgaattaagaaggccaaatatgacacaaagagga
agttacatggggcctagtcaagatattggtagtatgggtggctcagatacaaggggcgat
ggcatgcttaacattaaaactcctgattggagtggtccaggtcccgttgctgatcccgat
ataaggggtcaaacgagtcaaaatataggtctgggtctacatatgagaggtatagattgt
ggtgacccaggaacagtcatacgagatgattgcagaggtacagatatgagaggatcaggt
ccactcagagaagggccatttatacaagatgaatggagagtccctccacctaacagtaga
ggtccacacctggagaaccaagtacctaacagaagaggggttggagacctagactttaga
ggaccagcgtctgaaatgagctgtggactgatagaggacattaggcctgacaggaaaaga
tcagtgggtcccaatttcatggcaccagggggtccagaatttgtgagaccaggacttgaa
atgaatgatcaggataggatgggtcatgggcctaacagaagaggacctggagggccagat
gttaggggaccagggcctgtaagcagaggcttatctatggaaggacctgggcccgacagg
agaggacctggagggccagattttaggggaccaggacatgaaaggagaggtccagctatg
gagggtcctgggcctgacagaagagggcccggaggtccagatttccaaggaccaggaact
gaaagaagaggtccagctatggagggtcctgggcctgacaggagagagcccagaggtcta
gattacagggtgccagggcctgagaggagtggtcgagcttttgacggtcctgggcctgac
tggaaaggacctggaggtccagatttcagaggaacaggagctgaaaggagaggtccagct
atggagggtcctgggcccgacgggagaggacctgtaggtccagatttcatagatctagga
actggaaaaaaaagtccagctatggatgctcctagacccgacaggggacctggatgccca
gatttcagggggccaaggcctgaaagcagaggctttcctatggagggtaatgggcctgac
aggagaggacctggaggtccagttttcagaggtccaaggcctgagagaagaagtttatct
atggagcgttttgggcctgacagaagaggaactagtggtcaagatttcagagagccagaa
cctgaaagaagaggtccagctatggagggtcctgggcctgacatgagagtccccggaggt
ccagattttaaaggaccagggcctgaaatcagaagcttatctatggaggggcctgggcgt
gacaagagaggacctcaaggtccgaatttccgggtaccatggtctgaatgcagagactta
tctatggagggtcctgggcctgacaggagaggtactagaggtccaggtttcagagaacca
ggacctgagagaagaagcttatctatggaggctccaggacctggcagaagaggaccagga
ggtccagatttcagtggaccaggatccaatataagaggtcctggtatcactggtttaggg
ccttacacaggagaaccagaagttccagactttagtggtccaggcatagaaggtccaggg
cctcgagttagaggacaggaagtagtacctgatggtccacatttcagaagacctgggtct
gaaaggagaagttcatctttggagcgacctgggcctgacattagaggtcctggcagtcca
gatttcagagaaccaggacttttaactagaaatcaagcaatggaaggttctgggcctgac
atgagaggacctggagctccaaacaacaggggacgacaaggttttggtatggagggtcca
gatttcaacaggacaatgtcagatggtccagacatgaggaaaccagggcattcagatcca
aacaaagaaagcccaaggcctgagaggagagaaggtcaacattttagaggtcgtggtcca
aatagaaggcttccagagacagaggaaaactctgagagcagggactttccaggtggccaa
cactttagggctcctgagctagaaagaagaccttcagacatagtgggcccagggtctgat
agaagaaatccgtactcaagagggggcctgacagacaagtaccaggagattcaggcttca
aagagcctggacttgaaacgaggagtccagattttgagggccaaggaccagattggagaa
gaccaggtagtcatgactttagggacccaggaatcaggcacagaagtccaaaaagagaag
gtatga
DBGET
integrated database retrieval system
