KEGG   Notothenia coriiceps (black rockcod): 104952372
Entry
104952372         CDS       T04920                                 
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4
  KO
K04523  ubiquilin
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104952372 (ubqln4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104952372 (ubqln4)
   03051 Proteasome [BR:ncc03051]
    104952372 (ubqln4)
Membrane trafficking [BR:ncc04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    104952372 (ubqln4)
Proteasome [BR:ncc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    104952372 (ubqln4)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBA Ubiquitin_5 UN_NPL4 OTU1_UBXL YukD STI1-HOP_DP Dsc3_N HOIP-UBA Rad60-SLD_2
Other DBs
NCBI-GeneID: 104952372
NCBI-ProteinID: XP_010777482
UniProt: A0A6I9NLM4
LinkDB
Position
Unknown
AA seq 371 aa
MADNSNTDRTEDDNMDNTVASGGSMMVITVKTPNGKEDISISEDSSVSEFKQEVSKKFEA
QQDQLVLIFAGKILKDGDPLKQHGIKDGLTVHLVIKTVPKSTGDGPSQTSSNYGNPPSYS
SITTNPTVADRAEGGMSQTPTQTANPMGGLGDLSGLLGLGMGSSSFMEMQQQVQSQLMSN
PTMLTQMMGNPMVQNMMSNPDLMRQVLAGNPQMQNLMDSNPDVSSMFNNPELMRRIQSPE
TLSMLTNPRAMQALTQIQQGLQTLQTEAPGFLSRLSPGGLTVPPVTGGSIPQVNPQPPAM
TTASSPSQQQLMQQMLQMFSEGGPSLQGPEDRFRHQLEQLNTMGFVDRAANLQALNATGG
DLNAAIERLIN
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggccgacaatagcaacacagatcgcacggaggatgacaacatggataacactgttgct
tcaggaggatctatgatggtgatcactgtcaaaacccccaatggaaaagaggacatttct
atatcggaggactcttctgtctcagagttcaaacaggaggtatccaaaaaatttgaggcc
cagcaggaccagctggtgttgatatttgctggaaagattctgaaggatggtgatccttta
aagcagcacggtatcaaagacgggttaactgttcaccttgtcatcaagactgtcccaaaa
tcaacaggtgatggcccatctcagacaagttccaattatggaaaccctccaagttacagc
agcatcaccacaaaccccactgtagcggacagagcagagggtggcatgagtcagacccca
acacaaactgctaatccaatgggtgggctcggggacctgtctggcctgttgggcctgggc
atgggttcgtccagcttcatggagatgcagcagcaggtgcagagtcagctgatgtccaac
ccaacgatgctgacgcagatgatgggcaaccccatggtccaaaacatgatgtccaaccca
gacctgatgagacaagtgttagcaggcaatcctcagatgcagaatctcatggacagtaac
ccggacgtctccagcatgttcaacaaccctgagctcatgagacggattcagagtccggag
acactgtccatgctgaccaaccccagagccatgcaggccctcacccagatccagcagggc
ctgcagaccctacagacagaagcccccgggttcctgtccagactgtctcctggaggtctc
acagttcctccagtcacagggggcagcatcccccaggtgaaccctcagcctcctgccatg
acaacagcatccagtccctctcagcagcagctcatgcagcagatgttacagatgttctca
gagggcgggccatcacttcagggcccagaggatcggttcaggcaccagctagagcagctc
aacaccatgggcttcgttgaccgcgcagccaacctgcaggcgctcaacgctacaggaggg
gacctcaacgccgccatcgagagacttataaattaa

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