Notothenia coriiceps (black rockcod): 104952593
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Entry
104952593 CDS
T04920
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104952593 (trim16)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104952593 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
Remorin_C
BshC
COG6_N
Motif
Other DBs
NCBI-GeneID:
104952593
NCBI-ProteinID:
XP_010777747
UniProt:
A0A6I9NME3
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MADTAAVAAPVSQQQCTVCSGALSGEKTAACPHSVCGSCLGDKNKGCPKCLQSSDQPKPG
PKQNGTEAETPEIKSKEEQNPKTTREIKIQEDLKESEDPQKPEEEKKEGPLQTHGEKEEV
KEEEVKEEPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEP
LRDIERRTCESHKWPLELFCCADSCCVCQDCVTEEHKGHNTIPVVEARSQIEKELRDKQT
EMVKTVSAAENAINKLQLNTVTIESSVTEVKAVIETQFEELQAVMERAKREVTEILEADE
KQALRQADGIRVHLEQRCTELKKTQAQVEKLSKNKNDVDFLQEYSEWKKEATDNSLPGVS
IGLMDRLTSFSSVIVESTHELCAMLVSSYIEKVKETCKNDKMGIKTTVHEIVAAKQNMTV
PDPVTHTDFLKYSTNVSFDAETAHKFLRLTEENRKVTNTTPWQHPYPDVPERFENCRQVL
ATESFYLGRHYFEVDISGEGTHLGLTYKSIDRKGNESNSCITGNNFSWCLQWNGRTFSAW
HSDVETPLNVEKFTRIGVYVDYSRGLLAFYGVDDAMTLIHNYKAEFLEPIYPAFWLSKKE
NIVALVAPGELLRLKSPSPPTSPANGAIVPKTAA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagcagctgtagcagctccagtctcccagcagcagtgtactgtctgctca
ggtgcactgagtggggagaagacagcagcctgccctcactctgtttgtggctcctgcttg
ggggacaaaaacaaaggatgtcccaagtgtctgcagagctcagaccagcctaaacctgga
cccaaacagaacggaacagaggctgaaactccggagatcaagagcaaagaggagcagaac
cctaaaacaacgagggagatcaaaatccaagaagacctgaaggagtctgaagaccctcaa
aagcctgaggaggagaagaaagaggggccactccagacacatggagagaaagaagaggtg
aaagaagaggaggtgaaggaggaacctctgggccccgacgatgtggtgtgtgactcctgt
atcgagagcccctgcagggccctcaagtcctgcctcacctgcctggtgtcctactgcgag
gcccacctccggccccacctggagaaccccaagtttcagaaccaccggctggtggagccg
ctcagagacatcgagaggcggacctgcgagagccacaagtggcccctggagctgttctgc
tgcgctgactcctgctgcgtgtgtcaggactgtgtgacggaggagcacaagggccacaac
accatccctgtggtggaggctcgaagtcaaatagagaaggaactgagggacaagcagacg
gagatggtgaagaccgtgtccgcagcagagaacgccatcaacaaactccaactcaacaca
gtgactatcgagagttcagtgacagaggtgaaggcggtgatcgagacccagttcgaggag
ctgcaggccgtgatggagagggcgaagcgggaggtgacggagatcctggaggccgatgag
aagcaggcgctgaggcaggccgacggcatccgggtccacctggagcagaggtgcacggag
ctgaagaagacgcaggcgcaggtggagaagctctccaagaacaaaaatgatgtggacttc
ttacaggagtattcggagtggaagaaagaggccactgataactctctgcctggggtctcc
atcggcctgatggaccgtctgacctccttcagcagcgtcatcgttgagtccacgcacgag
ctgtgtgccatgctggtgtcttcatacatagagaaagtgaaagagacctgcaagaacgac
aaaatgggaatcaagacaacagttcatgaaattgttgcagcaaaacagaacatgactgta
ccggatccagtgacacacaccgacttcctcaagtattccaccaacgtgagctttgatgcg
gagaccgcccacaagttcctgcggctgacggaagaaaacaggaaagtgacgaacaccaca
ccctggcagcacccttaccctgacgtacctgagaggttcgagaactgccgccaagttctg
gcgacggagagcttctatctgggccgccactactttgaggtggacatcagcggcgagggc
acgcacttgggtttgacctacaagagcatcgaccgcaagggcaacgagagcaacagctgc
atcacgggaaacaacttctcctggtgtctacagtggaacgggcgcaccttctccgcctgg
cacagcgacgtggaaacccctctcaatgtggagaagtttactcgtatcggggtttacgtg
gactactcaagaggcctcctggctttctacggtgtggatgacgccatgacgctcatacat
aattacaaggcagagtttcttgagcctatttacccagctttctggttgtccaagaaggag
aacatcgtcgccttggtggcaccaggggagctattacgactcaaaagtccctctcctcca
acctcacctgcaaacggagcaattgttccaaaaacagcggcataa
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