KEGG   Notothenia coriiceps (black rockcod): 104957143
Entry
104957143         CDS       T04920                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104957143
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncc01009]
    104957143
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104957143
Protein phosphatases and associated proteins [BR:ncc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104957143
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104957143
    Little elongation complex (LEC)
     104957143
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 104957143
NCBI-ProteinID: XP_010783057
UniProt: A0A6I9P4F1
LinkDB
Position
Unknown
AA seq 675 aa
MLQPQRDDGGGLVKMAALSEDGRYGLNCGRQSADRVTVLHVKLTETALKAIESHQHCKNV
PSQRPTIQFKGLQGRIKIPKNDSSPDPFNSFEFYLSNVGKDNPQGSFECIHQYVASSGAS
HLAMLATVQDKVTVCATNDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKAPFYSQIP
NHLLKHKIKQKVANLNPKDNTFSLKDFIYRDIQRDWPGYSEDEKTQVDRIVARKLGLSLE
TLSSSSPSKDSVPTSPQKLQPDFDFIDPLAPKKARISHLSSRGPSSSSSSSDRPEGSPSS
KRSSLPSNVASGPPAHTPVPSHPAPSHQQPSPASHSNSPSTPEGCGTQDLPMDQSSSCRD
PSPSPFSSNRTPQDRYRTPVPRPAASPSPPPPPPTPLPLPPSSCTSLTVTSTVISSPPSS
SSANKKVKKKSKKHKDKDRERDKGKRTDKGSRSPPGAAEPAVDCRKAKRKRNAEEETRTQ
EEVIDKIPHKEQDSSDKEKPVKTEKPEKPEKPEKTEKPEKTEKPEKTEKPEKTEKPEKTE
KTEKTEKTDQPTEFSSTIEMPDYVVKYMPMVSIDQRQSYKDDFNAEYDEYRLLHARVENI
TRRFTQLDAKCRKMTPGTKEYQKVQEEVLKEYKKMKHHSPNYHEEKQRCEYLHNKLAHIK
RLIADFDQRRSTAWC
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgctccagcctcaaagggacgatggtggagggctggtaaagatggcggcgctctccgag
gatgggaggtacggattgaattgtggccgacagagcgctgatagagtcaccgtattacat
gtcaaattgaccgagacagcgctgaaagccatagagagccaccaacattgtaagaatgta
ccttctcagcggcccacaatacaattcaagggactccaagggcgcattaaaattcccaag
aacgattcctccccagaccctttcaacagttttgaattctacctgtctaatgtgggcaaa
gacaaccctcagggaagctttgagtgcatccatcagtatgttgcgagctcaggggcctca
cacctggcaatgttggccacagtacaggacaaagtcaccgtgtgtgccactaatgactcc
taccaggtgacccgggaacgcatgacccaggccgcggaagacactcgtgaacgtgggacc
aaagtcatcaagcctgggggccagtacagaggtaaggcccctttctactctcagatacca
aatcaccttcttaaacacaagatcaaacaaaaagtggccaacctgaaccccaaagacaac
acattctcactgaaggactttatttatcgagacatccagcgcgactggccgggctactct
gaagatgagaagacccaggtggaccggatcgtggctcgaaaattgggtctttctctggag
accctctcctcaagcagtccttccaaagacagcgtccccacgtccccgcagaagctccag
ccagactttgacttcatcgaccctctggcccccaagaaagcccggatctcccacctcagc
agccgggggccctcctcctcctcctcctcctccgaccgccccgagggcagccccagctcc
aagcgctcgtccctcccctccaacgtcgcctcgggcccccccgcccatactccagtcccg
tcccaccccgccccgtctcaccagcagcccagcccggcctcccactccaactcccccagc
acccccgagggctgcggcacccaggacctgcccatggaccagagctcctcctgcagggac
ccctcgcccagccccttctcctctaacaggaccccgcaggaccgctaccggacccccgtc
cccagaccggccgcctcccccagccctcctcctcctcctcccactcctcttcctcttccc
ccctcctcttgcacctccctcacagtcacctccactgtcatcagcagccccccctcgtcc
agcagcgctaacaagaaggtgaagaagaaatccaagaagcacaaagataaggatcgagag
cgggacaaagggaagcggacggacaaaggtagcaggagtccgcccggcgccgctgagccc
gctgtagactgtcgcaaagccaaaaggaagcgcaacgccgaggaagagacacgaactcaa
gaagaagtcatcgacaagatccctcacaaagaacaagactcttcagataaagagaagccg
gtgaagacggagaagccagagaagccggagaagccggagaagacggagaagccggagaag
actgagaagccagagaagactgagaaaccagagaagacagagaaaccagagaagacggaa
aagacggagaagacggagaagacagaccagcccaccgagttctcctctacaattgagatg
cccgactatgttgtgaagtacatgcccatggtgtccatcgaccagcggcaaagctacaag
gatgacttcaacgcagagtacgatgagtatcgcctcctacacgcccgcgtggagaacatc
acccgccgcttcacccagctggacgccaagtgccggaagatgacaccgggcaccaaagaa
taccagaaggtgcaagaagaagtgttgaaagagtacaaaaagatgaaacaccacagcccc
aactaccacgaggagaagcagcgctgcgagtatctgcacaacaagctggcccacatcaag
cggctcatcgctgacttcgaccagcgcagatccacggcctggtgctga

DBGET integrated database retrieval system