Notothenia coriiceps (black rockcod): 104957950
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Entry
104957950 CDS
T04920
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104957950
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104957950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
DUF5713
zf-RING_6
FapA
BAG
Motif
Other DBs
NCBI-GeneID:
104957950
NCBI-ProteinID:
XP_010783928
UniProt:
A0A6I9PAT4
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MALQLDQEKLCCPVCLDLLKDPGTLPCGHSFCMSCIESHWDEEDPKTIYSCPQCKQTFTP
RPVLGISTMLADLLEALKKTVPTDHFYTAPGDVACDFCTGRKLKALKSCLLCRVSYCELH
LQPHYESPAFKTHQLIKPSENLQEKFCSRHDEVMKIFCRTDQQTICILCSMDDHKDHDTV
SAAVERKEKRSEIGMSLQKIKLRIDDREKDVKALQQEMVEINASADEAVKNSEMILQQLV
SLIEKKGSAVKDEIRSQQKTEVSRVKELQEKMEEEIAQLRRKEAELEHLSHTDDHILFLH
KYPLLSNLSESDSPRLKIQSLKHFEDVEVAVTEARDKLQDILNEEGLKISLKVSEVDVLL
PQPEPKTRDEFLKYSRQITLDPNTVNTGLSLSEGNRKATVVREKQSYPSHRDRFSDCLQV
LSRESLTGRCYWEVQRGSGGVSVALSYKDISRTGSESGFGDNDQSWALGCFDTSYNFRHN
NIRTVLSGPQSSTIGVYLDHKAGELSFYSVSDTMTLLHRVQKTFTQPLHAGLWVYWVGDT
AELCELK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagctagaccaggaaaagctctgctgccctgtttgtctggatctactgaag
gatccagggactcttccctgtggacacagcttctgcatgagctgtattgaaagccactgg
gatgaagaggatccgaagacaatctacagctgccctcagtgcaaacagaccttcacaccg
aggcctgtcctggggataagtaccatgttagctgatttactggaagcgctgaagaagacg
gttccaactgatcacttttataccgctcccggagatgtggcctgtgatttctgcactgga
aggaagctgaaagccctgaagtcctgtctgttgtgtcgggtttcttactgtgagctccac
cttcagcctcactatgaatctcctgcctttaaaacgcaccagctgattaaaccctccgaa
aacctgcaggagaagttttgctcccgccacgacgaggtgatgaagattttctgccgcact
gatcagcagaccatatgtattttgtgctccatggatgaccataaggaccatgacacggtc
tcagctgccgtagaaaggaaagagaagaggagcgaaattgggatgagtctgcagaaaatc
aagctaaggatcgatgacagagagaaggacgtgaaggcgcttcagcaggagatggtggaa
atcaatgcctctgctgatgaggcagtgaagaacagcgagatgattttgcaacagcttgtc
agtctcattgagaaaaaaggctctgctgtaaaggatgaaatcagatcccagcagaaaact
gaagtcagccgggtcaaagagcttcaggagaagatggaggaggagatcgctcaactgagg
aggaaggaagctgagctggagcatctgtcacacaccgatgaccacatcctctttctacat
aaataccctttgctgtcgaatctcagtgaatctgactcacccagattaaaaatccaatcc
ctgaaacactttgaagatgtggaagtagctgtcacagaggcccgcgataaactacaagac
attctcaacgaggaagggctgaagatctcactaaaagtcagcgaggtagatgtcttactg
ccacaaccagagcccaagaccagagacgaattcctgaaatactcccgtcaaatcacactg
gatcccaacactgtgaacacggggctgtcgttatctgaagggaacagaaaagcaacagtt
gtgagagaaaagcaatcatatcccagtcaccgagacagattttccgactgtcttcaggtc
ctgagtagagagagtctgactggacgttgttactgggaggtgcagagaggcagtggaggc
gtttcagtggccctttcatacaaggatatcagcagaacagggagtgaaagtggatttgga
gacaatgaccagtcgtgggcattaggatgcttcgatacaagttataacttcagacataac
aacatcagaactgtgctctcaggccctcagtcctctacgataggagtttacctggatcac
aaggcaggagaactgtccttctacagcgtctctgacacgatgactctcctccacagagtc
cagaaaacattcactcagccgctacatgctggactttgggtttattgggttggagatact
gctgagttgtgtgagcttaagtag
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integrated database retrieval system
