Notothenia coriiceps (black rockcod): 104962982
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Entry
104962982 CDS
T04920
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncc01002
]
104962982 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104962982 (usp47)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104962982 (usp47)
Peptidases and inhibitors [BR:
ncc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104962982 (usp47)
Ubiquitin system [BR:
ncc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104962982 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
TFIIA
Tra1_central
MORN_2
MecA
Motif
Other DBs
NCBI-GeneID:
104962982
NCBI-ProteinID:
XP_010789823
UniProt:
A0A6I9PRC2
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MEMVPSEENQFVPKEGVFWSCRQSMFDEIKRISQIQNAAEEPRVLCIIQDITSSKTVNER
LTLNLPASTPLSKLYEDVAHKAGYVKATFDLAWGNTQDMAPLDHSSEMSLSDFGFEPGNK
RNFLQLTDKDGEQPQIASEESGTADSSGLDDSSQDRFIGPLPRDSTAGCSGDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYNWEFEESEEDPVTSIPHQL
QRLFILLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYSSVEEALHAFMQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMAFPEELD
MSPFMDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTEDCVDEGICLDSTGSTERVL
KPKNTLTFELFSVMVHSGSAAGGHYYACIKSFTDGQWYSFNDQHVSKITLDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDASKNAKYFDAEDFPEHVKSLVQKEKESEEQEKRQ
REIERNTCKIKLFCMRPVKTMMESKLEVHKDKTLREATEMAYKLMELDGAVPLDCCRLVK
YDEFHEYLERSYEGEDDTPMGMLLGGVKSSYMFDLLLEIRKPEQVFQPYKPGEVMVKVHV
VDLKTESIATPISVRAYLNQSITEFKLLIAQATGLSAEAMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSESTDHQVAFTDSLLWKLLDRHGNTIRLLVSLPEQSPGTLANRT
PCQKEGADSDVPLEGSKGDRKSVEAILEENTEKLKSLSLLQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQGTSDSQKSSDASDFEHIESPSQEADSNSSLCVAADNRELENRIRAGGSSGA
SSDPDNHFASEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSI
TSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKIKAEAQYLFFRAEPCSPEDATSDAQK
CVVVHVDKRITLAAFKQNMEPYVGVASTQFKVFRVYANNQEFESVRLNETLSSFSDDNKI
TIRLGRALKKGEYRVKVYQLLVNETEPCKFLVDTVFAKGMTVRQSKEELLPQLKEHCKLD
LSIESVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAVLSR
RWSPSTMKLGPFQEVILESSNVEELKEKLSELGDIPLENLEFAKGRGTFPCDISVLEIHQ
DLDWNPKVSTLNVWPLYICDDGAVVFFRHSSEEPMELSDEERSELMKKESSRLLKTGHRV
SYSPRKEKALKIYLDGGPPKDPGQD
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagggtgtgttttggagt
tgcagacagagtatgtttgatgagataaagaggatctctcagatccaaaatgcggctgag
gagcccagagtgctgtgcatcattcaggacatcaccagctcaaagacggtcaacgagagg
ctgaccctgaatctgccggcttccacccccctctccaaactctatgaagatgttgcccac
aaagcgggatatgtgaaagccacttttgaccttgcctggggaaatacacaggacatggca
ccactggatcacagcagtgagatgtccctctcagattttgggtttgagcctggcaataag
aggaatttcctccagctcacggacaaagatggagagcagccccagattgcatcggaagag
tcaggaactgcagatagcagcgggctggatgacagttcccaggatcgattcatcgggccc
ttaccgagagacagcacggcaggctgcagcggagactacagcagcccctcttactcctac
tcctccatcctcaacaaatcagacacaggttacgtgggcctggtcaaccaagctatgacc
tgctatttgaacagtcttctacaaaccctgtacatgacccccgagttcagaaatgctctc
tacaactgggagtttgaggagagtgaggaggatccagtcaccagcataccccaccagctg
cagaggctgtttattctgctgcagacgagtaagaaacgggcgatcgagaccaccgatgtg
acgcggagcttcggctgggacagcagcgaggcttggcagcagcatgacgtccaggagctg
tgcagggtcatgttcgatgccctggagcaaaagtggaagcagaccgagcaggcggacctg
atcaaccagctgtaccaggggaagctgaaggattacgtacgctgtctggagtgtggctat
gagagctggaggattgacacttacctggacatccctctagtgatccgacccttcggagcc
agccaggcctacagcagtgtggaagaagctttgcatgcgttcatgcaaccagaaactctt
gacgggcccaaccagtacttctgtgaacggtgcaaaaagaaatgtgacgcccggaagggt
ctgagatttctgcacttcccctacctgctgacgctccagctgaagcgctttgactttgac
tacaccactatgcaccgcattaagctgaatgaccgcatggctttccccgaggagcttgac
atgagtccattcatggatgtggaggacgagaagtcgcctcagaccgagagctgcactgac
agcggagcagagaatgaaggcagttgccacagcgaccagatgagcaacgatttttccact
gaagattgtgtagacgagggcatctgcctggacagcaccggcagcacggagagggtgctg
aagccaaagaacacgctgacctttgagctgttctccgtcatggtccactctgggagcgct
gcgggtggccactactacgcctgcatcaaatccttcactgatggccagtggtacagtttc
aatgatcagcacgttagcaagatcactctagatgatatcaggaagacatatgggggctcc
tcagggagcagaggctattactccagtgcctttgccagttctacaaatgcatatatgctg
atttatagattgaaagatgcctcaaagaatgcaaagtatttcgatgcggaggacttccca
gagcacgtcaagagtttggttcagaaggagaaagagtctgaagagcaagaaaagcgacag
agggagatcgagcgcaacacttgcaagataaagcttttctgcatgcgtcctgtgaagacg
atgatggagagcaagctggaagtacacaaggacaaaactctcagagaagcaacagaaatg
gcctacaagctgatggagctggatggagctgtgcctctggactgctgccgcctggtgaag
tacgacgagttccacgagtacctggagcgctcctacgaaggggaggacgacacacccatg
ggcatgctgctcggaggagtcaagtcctcgtatatgttcgacctgctgctggagatccgc
aaaccagagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcacgtt
gtggatctgaagactgagagcatcgccactccaatcagtgtccgggcctatttgaaccag
tcgatcactgaattcaaactgcttattgcacaggctaccgggctatctgcagaagccatg
cgtgtcgtcctggagcgttgctataacgaccttcggctcctgtatgttccaaacaagaca
cttaaagctgaagggttcttcagaagcaacaaggtttttgtagagagctccgagtcgacg
gatcatcaggttgctttcactgactcgctcctgtggaaactgttggatcgtcacggaaac
acgatccggctcttggtctcgctgcctgagcagtctcctggtaccttggccaacaggact
ccttgccaaaaagaaggagctgactctgatgtgcccttagagggttcaaagggtgacaga
aaatcagtagaggcgatcctggaggagaacacagagaagttaaagagcctgtctctgctg
cagcagcagcagcagcaacagcagcagcaacagcaacagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagggcaccagcgacagccagaaaagctctgacgcc
agcgactttgaacatatcgagtccccgagccaggaggcagactcaaactcttcgctctgt
gtggctgcagacaacagggagctagagaaccggatcagggccgggggcagcagcggcgcc
tcctcggaccccgacaaccactttgcctccgaggagcgctcggactctgaggtgaacaac
gaccgcagcaccagctcggtggacagcgacatcctgagctccagccacagcagtgacact
ctgtgcaatgcggacagcgggcccatacagctggccaacggcttggactctcacagcatc
acaagcagccgccgctccaaagcccacgagggcaagaaggagacctgggacacggctgaa
gaagactcagggacggacagcgagtacgacgacaacgggaagatcaaggcagaggctcag
tacctcttcttcagagcagagccgtgttctccggaggacgccacatcggatgcacaaaaa
tgtgtagttgttcacgtggacaagagaataacattagcagcattcaaacagaacatggag
ccctacgtgggagtcgcctccacccagttcaaggtgttccgggtgtacgccaacaaccag
gagtttgagagtgtacggctcaatgaaaccctctcatcgttctctgacgataacaagata
actattcgactagggagagcactgaaaaagggtgaatacagagtgaaagtgtatcagcta
ctagtgaatgaaacggagccgtgtaagttcctggtggacacggtgttcgccaagggcatg
acggtcaggcagtccaaagaggagctgctccctcagctaaaagagcactgcaagctcgac
ctaagcatcgagagtgtccgtctcaggaaaaagacctggaagaacccaggcacggtgttt
ctggactaccacgtctatgaagaggacatcagcatctcctccaactgggaggtcttcctg
gaagttctcaatgaaccggagaagatgaagtccatgtcgcagctggcggtcctgagccgg
aggtggagcccctctactatgaagctggggcctttccaggaagttatcctagagagcagc
aatgtggaagaactcaaggagaagctaagtgaattaggtgatattcctctggagaacctg
gagtttgcaaagggtagaggaacatttccctgtgatatttccgtgttggagatccatcag
gatctggactggaaccccaaggtgtcgactctcaacgtgtggcctctgtacatctgtgac
gacggagctgtggtcttcttcaggcacagctcagaggagccgatggagctgtcggacgag
gagcgcagtgagctgatgaagaaggagagcagccgtctgctaaagaccggacaccgtgtc
agctactcgccgcgcaaggagaaggccctcaagatctacctggacgggggcccacccaag
gacccggggcaggactga
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integrated database retrieval system
