Notothenia coriiceps (black rockcod): 104964090
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Entry
104964090 CDS
T04920
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104964090
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104964090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
SPAM
Prok-RING_4
FapA
Motif
Other DBs
NCBI-GeneID:
104964090
NCBI-ProteinID:
XP_010791114
UniProt:
A0A6I9PJC4
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MAQQGSQRDKDKLCCSICLDLLKDPVTIPCGHSYCLSCIKNYWDEENQKHVYSCPQCRQT
FEPRPVLMKNTVLAELVEEVKNKKTDVKASPADHCYAGPGDVGCDFCTGRKQKALKSCLQ
CLVSYCEQHLQPHYESPAFGKHKLVDPSNKMQEIICTRHNEVMKIFCRTDQQCICFLCSM
DEHKGHDTVSAAAEISEKQKELGVSRQNIQQRIQKREKDVKLLQKEVEAINLSADKAVID
SEKIFTDVKQQIRSRQESEVAHVNNLQEKLQEEIAELSRKDTELDRLSHTEDHTQFLQSY
SRFSSLSEATDSSSITARSLKYTEDVSAAVSEVRDKLQDIVSEERATMSLTETPQTKPKN
RTEFLKYVFDITLDQNTRNKHISSQSCIAGFSLNTDEWYAHPDSFTDWAQIMCRESLTGC
CYWEVEVKVSVLVAVAYKSISKKGDESFFGDNDKSWALECSNDGYKFRHNKIRTSLSGPK
PSRVGVYLDHSAGVLSFYSVAETMTLLHRVHT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaagtcagcgggacaaggacaaactctgctgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgtttgagctgtattaaa
aactactgggatgaagagaatcagaaacatgtgtacagctgtcctcagtgcagacagacc
tttgaaccgaggcctgtcctgatgaaaaacaccgtgttggcagagttagtggaggaagtg
aagaataagaagacagacgtcaaagcgtctccagctgatcactgctatgctggacctgga
gatgtgggatgtgatttctgcactgggagaaaacagaaagctctgaagtcctgtctgcag
tgtctggtctcttactgtgagcagcacctccagcctcactatgaatcccctgcctttgga
aaacacaagctggtcgacccctccaacaagatgcaggagatcatctgtactcgtcacaat
gaggtgatgaagattttctgccgcaccgatcagcagtgtatctgctttctctgctccatg
gatgaacataaaggccacgacacagtttcagctgcagcagaaatcagcgagaagcagaaa
gagctcggggtgagtcgtcaaaacatccagcagagaatccagaagagagagaaagatgtg
aagctgcttcagaaggaggtggaggccatcaatctctccgctgataaagcagtgattgac
agcgagaagatcttcacagatgtgaagcagcagatcagatctcgtcaggaatctgaagtg
gctcacgtcaacaatcttcaggagaagctgcaggaggagatcgctgagctcagcaggaag
gacaccgagctggaccgactttcacacacagaggaccacacccagttcctacagagttac
agcaggttttcaagtctgagtgaagctacagactcctccagcatcacggctcgttccctg
aagtacactgaggacgtgtctgcagctgtgtcagaggtcagagataaactacaggatatt
gttagtgaggaacgggccacgatgtcattaacagagactccacagacaaagcccaagaac
aggactgaattcctcaaatatgtatttgatatcacactggatcagaacacaaggaacaaa
catatcagctctcagtcttgcattgcaggattcagcttgaataccgatgaatggtatgct
cacccagacagtttcactgactgggctcagattatgtgcagagagagtctgactggatgt
tgttactgggaggtggaggtaaaagtgagtgttttggttgctgttgcatacaagagtatt
agcaaaaaaggagatgaaagtttttttggagacaatgacaagtcttgggctttggagtgt
tccaatgacggttataaattcagacataacaaaatcagaacatcactctcaggtcctaag
ccctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtc
gctgaaaccatgactctcctccacagagtccacacc
DBGET
integrated database retrieval system
