Notothenia coriiceps (black rockcod): 104966338
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Entry
104966338 CDS
T04920
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncc03009
]
104966338 (shq1)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
104966338 (shq1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SDF
SHQ1-like_CS
DUF4123
Motif
Other DBs
NCBI-GeneID:
104966338
NCBI-ProteinID:
XP_010793829
UniProt:
A0A6I9PS67
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MITPAFDLSQDPEYLILCIRVPYTRTSEFDLFIDGTDFKFYAKPYFLSFAAGLFTVWVPK
ETTGEHFEGLQMLTSLLAPKGARSAKPLIEDVSTGCSEGAGDADEDEDEEEFDWQVEQEE
YKESSEEELGALQKYGFGNQRSGVFARLQEELTDVIDVKNPEGATAAERRRGRQEVEASD
FSPDHYLADLFEDEEIKRLLKFSPWWAKLSPTEQQQEAAVSFTDGEKEQLRKFTNRSYLL
DKASRNQVWLSLVDILLTYSYEVRSTEGEHNVESPWTIRKLSGTLCWLETYSSLQDVLVS
FGRRVLCYPLYRHFSMVSAAVRDTTKILQSGNSATLPVTFKCLEENNKIDKRITRFVLPV
GATINMDGTALYEALAAIFIAQVNNVEMNFGQILTIRQPPHRSCLHNRWRTVLSLKN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgataactcctgcgtttgacctgagccaagatccagagtacctgatcctctgcatccga
gttccctacaccagaacatcagagtttgacttgttcattgatggcacagatttcaagttc
tacgccaagccctactttctcagttttgctgcaggtctgttcaccgtctgggtccctaag
gaaacgactggagaacactttgaaggacttcagatgctgaccagcctcctcgctccgaaa
ggcgcccgctcagcaaaaccactgatagaggacgtgagcacaggatgcagtgaaggcgct
ggagatgctgatgaggatgaagatgaggaagagtttgactggcaggtggagcaggaggag
tacaaggagagctctgaggaggagctgggggcgctgcagaaatatggcttcggcaatcag
aggtctggagtgtttgcacgattacaggaggaactgaccgacgtgattgatgtgaagaac
ccagaaggggcgacggcagcagagaggaggcgcgggcggcaggaagttgaggcgtctgat
ttttctcctgaccattacctggctgatttgtttgaggatgaggagataaaaaggctgctg
aagtttagtccatggtgggcaaagctgagtcctacagagcagcagcaggaggctgctgta
tcattcaccgacggcgagaaggagcagctgaggaaattcacaaaccgttcctacctgctg
gacaaggcgtcccgtaaccaagtgtggctgagcctcgtggacatcctgctgacatattcc
tatgaagtgcgctctacagagggagagcacaacgtagagtcaccgtggacgatcagaaaa
ctcagcgggactctctgctggctggagacgtacagctccctgcaggacgtcctggtgtcc
tttggacggagggtgctgtgctacccgctctacagacacttttccatggtgtctgcggcc
gttcgtgacacgactaagattttgcagtcaggtaactctgcaaccctgcctgtcaccttt
aaatgtctggaggaaaacaacaaaattgacaagagaatcacccgcttcgtgctgccggtg
ggagccacgatcaatatggatggaacggcgctttatgaggcgctggcagccatctttata
gcccaggtcaacaacgtggagatgaactttggtcagatcctcaccatcaggcagccgccg
caccgcagctgcctgcacaatcgctggaggactgtgctgtcactcaaaaactga
DBGET
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