KEGG   Notothenia coriiceps (black rockcod): 104966338
Entry
104966338         CDS       T04920                                 
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
  KO
K14764  protein SHQ1
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncc03009]
    104966338 (shq1)
Ribosome biogenesis [BR:ncc03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    104966338 (shq1)
SSDB
Motif
Pfam: SHQ1 SDF SHQ1-like_CS DUF4123
Other DBs
NCBI-GeneID: 104966338
NCBI-ProteinID: XP_010793829
UniProt: A0A6I9PS67
LinkDB
Position
Unknown
AA seq 417 aa
MITPAFDLSQDPEYLILCIRVPYTRTSEFDLFIDGTDFKFYAKPYFLSFAAGLFTVWVPK
ETTGEHFEGLQMLTSLLAPKGARSAKPLIEDVSTGCSEGAGDADEDEDEEEFDWQVEQEE
YKESSEEELGALQKYGFGNQRSGVFARLQEELTDVIDVKNPEGATAAERRRGRQEVEASD
FSPDHYLADLFEDEEIKRLLKFSPWWAKLSPTEQQQEAAVSFTDGEKEQLRKFTNRSYLL
DKASRNQVWLSLVDILLTYSYEVRSTEGEHNVESPWTIRKLSGTLCWLETYSSLQDVLVS
FGRRVLCYPLYRHFSMVSAAVRDTTKILQSGNSATLPVTFKCLEENNKIDKRITRFVLPV
GATINMDGTALYEALAAIFIAQVNNVEMNFGQILTIRQPPHRSCLHNRWRTVLSLKN
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgataactcctgcgtttgacctgagccaagatccagagtacctgatcctctgcatccga
gttccctacaccagaacatcagagtttgacttgttcattgatggcacagatttcaagttc
tacgccaagccctactttctcagttttgctgcaggtctgttcaccgtctgggtccctaag
gaaacgactggagaacactttgaaggacttcagatgctgaccagcctcctcgctccgaaa
ggcgcccgctcagcaaaaccactgatagaggacgtgagcacaggatgcagtgaaggcgct
ggagatgctgatgaggatgaagatgaggaagagtttgactggcaggtggagcaggaggag
tacaaggagagctctgaggaggagctgggggcgctgcagaaatatggcttcggcaatcag
aggtctggagtgtttgcacgattacaggaggaactgaccgacgtgattgatgtgaagaac
ccagaaggggcgacggcagcagagaggaggcgcgggcggcaggaagttgaggcgtctgat
ttttctcctgaccattacctggctgatttgtttgaggatgaggagataaaaaggctgctg
aagtttagtccatggtgggcaaagctgagtcctacagagcagcagcaggaggctgctgta
tcattcaccgacggcgagaaggagcagctgaggaaattcacaaaccgttcctacctgctg
gacaaggcgtcccgtaaccaagtgtggctgagcctcgtggacatcctgctgacatattcc
tatgaagtgcgctctacagagggagagcacaacgtagagtcaccgtggacgatcagaaaa
ctcagcgggactctctgctggctggagacgtacagctccctgcaggacgtcctggtgtcc
tttggacggagggtgctgtgctacccgctctacagacacttttccatggtgtctgcggcc
gttcgtgacacgactaagattttgcagtcaggtaactctgcaaccctgcctgtcaccttt
aaatgtctggaggaaaacaacaaaattgacaagagaatcacccgcttcgtgctgccggtg
ggagccacgatcaatatggatggaacggcgctttatgaggcgctggcagccatctttata
gcccaggtcaacaacgtggagatgaactttggtcagatcctcaccatcaggcagccgccg
caccgcagctgcctgcacaatcgctggaggactgtgctgtcactcaaaaactga

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