Notothenia coriiceps (black rockcod): 104967338
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Entry
104967338 CDS
T04920
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104967338 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104967338 (ttc37)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104967338 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_12
TPR_8
TPR_17
TPR_11
YceG_bac
ANAPC8
Motif
Other DBs
NCBI-GeneID:
104967338
NCBI-ProteinID:
XP_010795049
UniProt:
A0A6I9PVR1
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MVLLVEKKVPQLAKVKLLLIQVKEEEGVDKKELLQLWQQLTKLLSDCLNGEEQDNEIQQH
IITAFEKAMVLMDPVPGEEHKKMSADYVKCLSKLPQEEPKMKEACESMLSLYPNQSYPLE
VLCSHYLKTGVQDEGAVSCFSRLLDVAPNSGIGHLGLGTKALQEGRFKDAIRDLSQVSSG
LENFALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNKELAHEAFKIAQSLEPLYVNCWI
GQALIAERVGSFDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSTLYRYNIVQM
NAVSAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQAVQAYKRAVELLQSTSSEEAL
AFALGSYGRALCTSGQSEEAVRVYSSTPLQELSDLAGLALSSCRAGLIPESISAYERASA
VASSEKEKAYILTALALLQHRLGNLDSAKTLLFKCSMLKEPIPESLLCLCALGLVQSDAT
LSAAALTELLKQGPASGSVIEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWAL
LSRLVPQYYPRKANGGAMAGHVACLSSMTLGKRALLYSGVNQLANGKHSGEDKHRNALKT
MQRAVMLCPDDPATWAGLMAACHTENTSCYLSGSAPCRRGLEQTLMSVVSEKVHNVEEIE
RPLAQTLEGWVLQQAVTGLMLGGQLEQAEALCTQVLSASPEHPAVMLSLRQVQCQRLLLA
GGGTVLPDSVLEQLKNTVMMNPTNLGGWHWLAEVYRSQGLLPQAVMAYRQSLQISSQLGL
HISQISSLLRLALLALGPSMAGVPGNDWTNMIVEATAEVLKLGSSSVALLFQALLHFVTK
MAARETRRLLERLVYSQDVPVTVVQVASWYLLRHLHSKNDQELINVLFQYAKINRDQRLL
DFHSLLSSSSA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggttttattggtggagaaaaaagtccctcaattggcaaaggttaagctgctgctcatt
caagtgaaggaagaagagggagtggacaagaaagagttactgcagctatggcaacagctg
accaaactgctctcagactgcctcaatggggaagagcaggacaatgaaattcaacaacat
ataatcactgcatttgaaaaggccatggttctcatggaccctgtcccaggagaggaacac
aagaagatgtcagctgactatgtcaaatgtctttctaaactgccacaggaagaacccaaa
atgaaagaggcatgtgagtccatgctctcgctctacccaaaccaaagctatcctcttgag
gtgctttgttctcattacctcaaaacaggtgttcaggatgagggtgcagtcagctgtttc
tcccggctcctggatgtggcccctaacagtggaataggtcacctgggtctgggcaccaaa
gcactgcaagaagggaggtttaaagatgccatcagggacctttcacaagtttcgtcaggt
cttgagaacttcgctctggctcaacactgcttcatcaagtccattcaagttgaaccaaat
aatgttgttgcttggaccaaccttggcaccctgtatttaaagaaagacaataaagagctg
gctcacgaggccttcaagattgcccagtccctggagccgctttacgtcaactgctggatc
ggacaggcgctgatagcagagagagtgggaagctttgacaccatggatctcttcagacac
accactgaactcagcactcatatggagggagtgaagggttatgcttactgggtatgttcc
accctgctggacaagagcaacagagactcgacactgtaccgctacaacatagtccagatg
aacgccgtctctgctgctcaggtggctctcagcaagtacacagagaggatccagtccgac
cccgatgccttcattatgctcggctacctgaatgagcatctgcagctgaagaggcaggcc
gtgcaggcttacaaaagagctgttgaacttctccagtccacgtcctctgaagaagcgctg
gcctttgctctgggcagctatggccgtgcattgtgcacctcagggcagtcggaggaggcg
gtgcgtgtttatagctccacccccctgcaggagctcagtgatctggctggtctggctctg
tcctcctgcagggccggactcatcccagagagcatcagcgcctatgaacgtgcctcggct
gtggcttccagtgagaaggagaaggcgtacatcctgacagctctggcgctgcttcagcac
cggctggggaacctggactcagccaagactctgctgtttaaatgctcgatgctgaaggag
ccaatcccggagtctctgctgtgtttatgtgcgctgggattggtccaaagtgatgctacg
ctgagtgctgctgcgctgacggagctgctgaagcagggtccagcctctgggagtgtgatc
gagcagcggtgtctgctcacctgcgccctgctcgccctgcaggggaactacagcgccgtg
caacgagaggcttccagagctgtgcacagcaatcctggaaacccgtctctgtgggccctg
ctgtccagactggttccacaatactacccaaggaaggcaaatggtggagcgatggctggt
catgttgcctgtctctccagtatgaccctaggaaagagagcgttgttgtacagtggagtg
aaccagctggctaatgggaaacactctggagaggacaaacacaggaatgcactgaagact
atgcagagagctgtgatgctttgtcctgatgatccagccacgtgggcgggattaatggct
gcctgtcacacagaaaacacttcctgttacctttcaggttctgctccttgcagacgagga
ctagagcaaaccctcatgtcagtggtttcagagaaagtgcataatgtggaggagatcgag
cgccctcttgcacagactctggaaggctgggtgctacaacaagcagtgactggtctcatg
ctgggaggacagctggagcaggcagaagccctctgcacacaggtgctgagtgcttctcca
gagcacccggcagtgatgctgtccctgagacaggtgcagtgtcagcgcctccttttggcc
ggtggtggtactgtcctgccagactccgtgctggagcaactaaaaaacacagtgatgatg
aaccccacaaaccttgggggctggcattggctggccgaggtgtatcgtagccagggtctg
ctcccccaggcggtcatggcctacaggcagagtctgcagatctcctcacagctcggcctg
cacatcagccagatttcctctctgctgcgacttgccctgctggccctgggaccctcgatg
gcgggtgtcccagggaacgactggaccaacatgatcgtggaagccaccgctgaagtgttg
aagctgggctcctcctctgtggccctcctgttccaggccctgctccattttgtgaccaag
atggctgctagggaaaccaggcgtttgttggagaggctggtgtactctcaggacgtccca
gtgacggtggtgcaggtggccagctggtacctcctcagacacttgcatagcaaaaacgac
caggagctaataaatgtccttttccaatatgccaaaatcaacagagatcagagactgctc
gactttcattcactgctttcctcttcgtcagcttga
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