Vairimorpha ceranae: NCER_100425
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Entry
NCER_100425 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
nce
Vairimorpha ceranae
Pathway
nce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCER_100425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nce03041
]
NCER_100425
Enzymes [BR:
nce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCER_100425
Spliceosome [BR:
nce03041
]
Complex C
Other components
Step II factors
NCER_100425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_N
HA2_C
ResIII
AAA_22
AAA_7
AAA_19
T2SSE
nSTAND3
DUF4745
AAA_30
AAA_11
Glyco_transf_5
Motif
Other DBs
NCBI-ProteinID:
EEQ82819
UniProt:
C4V7J2
LinkDB
All DBs
AA seq
723 aa
AA seq
DB search
MDMRKDIIDVFNTKNIAYTVDLINNVYTYLTSDNYEDLEKIVSKDIFTDLVNLKKITEEN
FYGQDAQLSEDIFLKWEIPNKLLVDKFTVEKPIKNYDLEILNFLNNEADIENLDGEDSVE
KKMDLITKLLDEKKIVLVQGDTGCGKTTKIPMYLLKKYNSIVCTQPRRIAAISVAKRVAH
CMGSKVGDLVGYAVRFDDRTSAKTKLKYVTDGILLSEMIHRGNLNRYDCLIIDEAHERTI
NIDILLGICKQIINENSKLRILLMSATMSTQKFVDFFNCPFVNIKHKVFPLENYFLKQYN
SENWFYETIKTVIQIHNTEPKGDILVFLTGQEEIKDAYQILTTSLNLETCKILMIYSAMS
INDQEEVFLNTEKRKIVLSTNICETSVTIENIVYVVDSGRVKQMRHSCFLGLDILETLMI
SKAQAKQRSGRAGRTGPGKTFRIYTKQEFLQMKDSLLPEILTTNVCKCILTIKSLGINNL
NNFKMIDMPNPDSINDALEYLFLARAVDSVGDITDLGRKMARLPLDPYLSLTLIRSEELG
CFEDVAIIAAMLTVDQIYVDVKKDDNFLYKKFLTVKSSWNDDRGDFFVLLKIFNAWKKEK
YSNKFCKYNFLSLRNMWQAKKIKDQLSFMFNYNNSSNKSKVIEAFSFGYFMNIAKIKEDG
YYTIFKQTECYIHSSSCLYKKREPFILYFSIVRTKREFLKFCNVVTPEILCKSVNNVFIK
KNK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcggaaagatattattgacgttttcaatacaaaaaatattgcttatacagta
gatttaataaataatgtttacacgtatctaacatctgataattatgaagatttagaaaaa
atagtttctaaagatatttttactgatctcgtaaatttgaaaaaaatcaccgaagagaat
ttttatggtcaagatgctcaactgtctgaagatatttttttgaaatgggaaataccaaat
aaattattagttgacaaatttacagttgagaaacctataaagaattatgatttagaaatt
ttgaattttttgaataatgaagcagatattgaaaacttagatggagaagattctgtagag
aagaaaatggatcttatcacaaaattactggatgaaaaaaagatagttcttgtacaaggg
gataccggttgcggaaaaactaccaaaattccgatgtatttgttaaaaaagtataactca
attgtatgtacacaaccgagaagaatagctgctatttcagtagctaaacgagttgcgcat
tgtatgggtagtaaagtaggagacttggtgggctatgctgttagatttgatgatcgtact
agtgcgaagacaaaattaaaatatgttacagatggaatattactaagtgaaatgattcat
agaggaaacttaaataggtatgactgtttgattattgatgaagcacatgaaagaactatt
aatattgatatattattaggcatttgtaaacaaattattaatgaaaattcaaagttgcgc
attttattgatgagtgctactatgtcgacacaaaagtttgtagatttttttaattgtcct
tttgtgaatattaagcacaaagtatttcctctcgaaaattattttttaaaacaatataat
tctgaaaactggttttatgaaactattaaaactgtaatacaaattcataacaccgaacca
aaaggtgatattttagtatttttaactgggcaagaagaaattaaagatgcctaccagatt
ttaactactagtttaaatttagaaacttgtaaaattttaatgatttacagtgctatgtca
ataaatgatcaagaagaagtattcttgaatacagagaaaagaaagattgttttgtctact
aatatttgtgagacatcagtgacaatagaaaatattgtctacgttgtagactcgggaaga
gtaaaacaaatgcgccattcatgttttcttggattggatatcttagaaacattaatgatt
agtaaagcgcaagcaaaacaaagaagcggcagagcaggtcgcacgggacctggtaaaaca
tttagaatatacacaaaacaagaatttttacaaatgaaggattctctattacccgaaatt
ttaactactaatgtttgtaagtgtattcttactataaaatctttaggtatcaataatctg
aataacttcaaaatgattgatatgcctaatccagattcaattaatgatgcattagaatat
ttattccttgctagagcagtggatagtgttggagatattacagatttaggaagaaaaatg
gcacgtttaccacttgatccatatttatcactcacattaattagatctgaggaacttggt
tgttttgaagatgttgcaattattgctgcaatgctaactgtcgatcaaatttacgtggac
gtaaaaaaggacgacaattttttatataaaaagtttctaactgtcaaatcatcctggaac
gatgacagaggagatttttttgtcttactaaaaatatttaatgcatggaaaaaagaaaaa
tattctaacaagttttgtaagtacaattttctgtctctacgaaatatgtggcaggcaaag
aaaattaaggatcaattatcttttatgtttaattataacaattcttcaaacaaatctaaa
gttattgaagctttttcttttggatattttatgaatatagcgaaaattaaagaagatgga
tattacaccatatttaaacaaacagagtgttatatacacagttccagttgtctttataaa
aaaagagaaccctttatcttatatttttctattgttagaacaaaaagagaatttttaaaa
ttctgtaatgttgtcacgccagaaattttgtgtaaaagtgtgaacaatgtgtttatcaaa
aaaaataaataa
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