KEGG   Vairimorpha ceranae: NCER_100511
Entry
NCER_100511       CDS       T01614                                 
Name
(GenBank) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nce  Vairimorpha ceranae
Pathway
nce03030  DNA replication
nce03410  Base excision repair
nce03420  Nucleotide excision repair
nce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCER_100511
   03410 Base excision repair
    NCER_100511
   03420 Nucleotide excision repair
    NCER_100511
   03430 Mismatch repair
    NCER_100511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nce03032]
    NCER_100511
   03400 DNA repair and recombination proteins [BR:nce03400]
    NCER_100511
Enzymes [BR:nce01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NCER_100511
    6.5.1.6  DNA ligase (ATP or NAD+)
     NCER_100511
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NCER_100511
DNA replication proteins [BR:nce03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NCER_100511
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NCER_100511
DNA repair and recombination proteins [BR:nce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NCER_100511
   NER (nucleotide excision repair)
    Other NER factors
     NCER_100511
   MMR (mismatch excision repair)
    Other MMR factors
     NCER_100511
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase LSM12_LSM
Other DBs
NCBI-ProteinID: EEQ82740
UniProt: C4V7S3
LinkDB
AA seq 592 aa
MENEIKPNSFLYFSKIMEKISQRSGRIEIQDMLTEYFRDVISINKNDLIYVIYLCTHTIY
PEYKNQQLNLGEKILFDVLKECTSKDITILKKEYTKIGDFGTIGMTYRTRQLFISKKTLS
AKDVVYALREIAEISGIKSRIYKIRKMLDLISSCTPIEIKFLFRLFEENLKVKFALKTVL
AAFAKLYDSAYIDKIKEAYNRRPDIEQLVIEILTNGISTVDTNFNIEPGIPLKPMLAQPT
KNISTAFKRVENKKFTCENKYDGERIQIHRHNNQMTLYSRNLENTTDKYFDIIIKSNTDK
DFVIDGEVVAYDPEQKKILTFQKLSTRKRKDFSKKETVNVCVFVFDILYFDGLELINKSL
EDRRAILHKEFTEVEGKFFFSEFKDCENIEEVDEFFRQSINSQYEGIMIKLLGDGSNYIP
SQRCNSWIKLKKDYIESGSDSFDLVVVGAYYGKGKRTGWYGGFLLASYNENDEMFETVCK
IGTGFDDSLLSKLYEEVNNYVVSIPSRVKYKEQTKPDVWITPKFVWEIKAAAVSASPIYC
CGIDIEEKGFSLRFPRFLNEREDKDVTDATTSLQIVMNYKEYEGESKVLDDI
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggaaaatgaaataaaaccaaactcgtttttgtattttagcaaaattatggaaaagata
agtcaaagatctggaagaatagaaatacaggatatgcttacagaatattttagagatgtt
atttctataaataaaaatgatcttatttatgttatatatctctgtacacatacaatatat
cctgaatataaaaatcaacaactaaatcttggtgaaaaaatactttttgatgtgcttaaa
gaatgtacaagtaaagatattacaatactaaaaaaagaatatacaaaaattggagatttt
ggcactattggtatgacttatcgtactagacaactttttatatctaaaaaaacactatct
gcaaaagatgttgtatatgctttaagagaaattgcagaaatctccggaataaaatctaga
atttacaaaattcgtaaaatgttggatcttatctcttcatgcactcctatagaaataaag
tttttattcagattatttgaagaaaacttaaaagtaaaatttgccttgaaaactgtactg
gcagcatttgctaaattgtatgatagtgcttacattgataaaataaaagaggcatataat
agacgaccagatatagaacaacttgttatagaaattcttactaacggcatatcaacagta
gatacaaatttcaatattgaacctggtattccacttaaaccgatgttagcacaacccacc
aagaatatttctactgcatttaagcgtgtcgaaaataaaaaatttacatgtgaaaataaa
tacgacggtgaaagaatacaaatacaccgacacaacaaccaaatgacattgtattcaaga
aatttagagaatacaacagataaatattttgatataattattaaatcaaacactgataaa
gattttgtaatagacggagaagtagtagcttacgatcctgaacagaaaaaaatattgact
tttcaaaaattgtctacaaggaaacgaaaagatttctcaaaaaaagaaacagtaaatgtt
tgcgtctttgtttttgatattttatattttgatggtttggaacttattaataaatctttg
gaagatagaagagcaattttacacaaagaatttacggaggtggaagggaagtttttcttt
tctgaattcaaggattgtgaaaatattgaagaagtagatgaattttttagacaaagtatt
aattctcaatatgaaggtataatgataaaattattaggtgatggatcaaattatattcca
tcacaaagatgtaactcttggatcaaattaaaaaaagattatattgaaagtggctctgat
tcttttgatttagtagtagtaggggcatattatggtaaaggtaaaaggactgggtggtac
ggtggatttcttttggctagttataatgaaaatgacgaaatgtttgaaactgtctgtaaa
attggtacgggatttgatgattcattgcttagcaaattgtatgaagaagtaaataattat
gtagtgtcaattccttcccgagttaaatataaagaacaaacgaagcctgatgtatggatt
acccccaaatttgtatgggaaattaaagcagctgctgtgtctgcctctccaatttactgc
tgtggaatagacattgaagaaaaaggcttttctttaagatttcctagatttttaaatgaa
agagaagataaagacgtaacagatgctactacatctttacaaatcgttatgaattacaaa
gaatatgagggagaaagtaaggtgttagatgatatctaa

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