Vairimorpha ceranae: NCER_100934
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Entry
NCER_100934 CDS
T01614
Name
(GenBank) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nce
Vairimorpha ceranae
Pathway
nce03022
Basal transcription factors
nce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCER_100934
09124 Replication and repair
03420 Nucleotide excision repair
NCER_100934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nce03021
]
NCER_100934
03400 DNA repair and recombination proteins [BR:
nce03400
]
NCER_100934
Transcription machinery [BR:
nce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCER_100934
DNA repair and recombination proteins [BR:
nce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCER_100934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-ProteinID:
EEQ82366
UniProt:
C4V8T9
LinkDB
All DBs
AA seq
403 aa
AA seq
DB search
MVDLNIIIDYIRQLKLIHKQHLYNSPVLATSIIKIFDDSTIRLIYDLLLTAPSIKSLQKN
EEIKNSLKTLLKISLIYKKGTNIFIDNIFRNAFLTGIELNNLNEYYEILEPIKCTVSKNT
KFEEILKFLVTKNNVNHAPGVVNVLKFSNLIDNNYDITNKGFEFLLKPRYDQYWFLIIAA
LKFYCVDEILQISNFMSIMELSNMLPIYKYKLKKDVNKKFYDFLSYLGLIKLENDILTIY
HNLFVKSDTKKLRFILLETNFKLYAYTSSVYEMSIIQLFSNIYLKMPNLIKASITEESLS
NAFSKGVTSQQIINFLKSYSLFEDIPVAIISQIIIWETKRKRIKIFPGYLYSNFLNLIDY
QKVVKFCLSNDCIIEKDDEKRMIVIKPDHNEVVKKFVKQQINK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtagacttaaatataataatagattacattagacagttaaaattaatacacaaacaa
catttatacaattcaccagtattggcaacatctattataaaaatatttgatgattctacc
attcgtcttatatacgatcttttacttactgcaccatcaatcaaatcactacaaaaaaat
gaagagataaaaaattcgttaaaaactttacttaaaatatctttaatttataaaaaaggt
actaatatttttattgataacatttttagaaatgcatttcttacaggaatagaacttaat
aatttgaatgaatactatgaaatattagaacctataaaatgtacggtaagtaaaaataca
aaatttgaagaaatactaaaatttcttgttactaaaaataatgttaatcacgcacctggt
gtagtaaatgtactaaagtttagtaatctaatagataataattatgatataacaaataaa
ggctttgaattcttactaaagccaagatatgaccaatactggtttttaattattgctgca
ttaaaattttattgtgtagacgaaatactacaaatatcaaattttatgagtattatggag
ctatcaaatatgttgccgatttacaaatacaaactaaaaaaagatgtaaacaaaaaattt
tatgattttttaagttatttaggattaattaaattggaaaatgatatattgacaatatat
cacaatttgtttgttaaaagtgatactaaaaaattaagatttattttattagaaacaaat
tttaagttgtatgcatatacatcatctgtgtatgaaatgtctattatccaattattttct
aatatttatttaaaaatgccaaatttaattaaagctagtataactgaagagagtttatct
aatgcattttctaaaggtgttacaagtcaacagattataaatttcttaaaatcttattct
ctttttgaagacattcctgtagcaataattagtcaaattattatatgggagacaaaacgt
aagcgtataaaaatattccctggatatttatattccaatttcttaaatttaatagattat
caaaaagtagtaaaattctgtttatccaacgattgtattattgagaaagatgatgaaaaa
agaatgattgtaattaaacctgatcacaatgaagtagtaaaaaagtttgttaagcagcaa
attaataaataa
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