Vairimorpha ceranae: NCER_101719 Help Entry NCER_101719       CDS       T01614                                  Name (GenBank) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism nce  Vairimorpha ceranae Pathway nce03020   RNA polymerase nce03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:nce00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     NCER_101719   09124 Replication and repair    03420 Nucleotide excision repair     NCER_101719  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nce03021]     NCER_101719    03400 DNA repair and recombination proteins [BR:nce03400]     NCER_101719 Enzymes [BR:nce01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      NCER_101719 Transcription machinery [BR:nce03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      NCER_101719 DNA repair and recombination proteins [BR:nce03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       NCER_101719 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7 RNA_pol_Rpb1_6 RNA_pol_Rpb1_R Motif Other DBs NCBI-ProteinID:  EEQ81731 UniProt:  C4VAM1 LinkDB All DBs AA seq 1612 aa AA seqDB search MFDEIVKKRITSIQFGLFSPEEIRKASVVQVIHPETMENGFPKPGGLIDLKMGTTERAFL CSSCEKDNFSCPGHFGHIELTKPMFHVGYMSKIKKILECVCYYCSKIKIDKKHLKKDLNF VWNSCKTKSVCEGELTEAGFSGCGNKQPVIKKEGMGLVAFMKGEEDSDGKVILNGERVHN ILKKISDEDSTYLGFDTKYSKPDWLVITVLLVPPPSVRPSIVMEGMLRAEDDLTHKLADI VKANTYLKKYELEGAPGHVIRDYEQLLQFHIATMIDNDLSGQPQALQKSGRPIKSISARL KGKEGRVRGNLMGKRVDFSARSVITPDANISLEEVGVPLEIAKIHTFPETITPYNIERLT RLVSNGPNEYPGANYVIRSDGQRIDLNFNRGDIKLEEGYIVERHMQNGDVVLFNRQPSLH KMSMMGHFVRVMEGKTFRLNLSCTSPYNADFDGDEMNLHMPQSYNTKAELEELCLVSKQV LSPQSNRPVMGIVQDSLTSLRLFTLRDTFFDKRETMQLLYSINLSKYENFNNEDMHKTSI MDLLNYPTISYPKKLWTGKQIFSYILPNIVYSAVSNEHDENDLENLKDTVVIIRNGELLS GIIDKKSVGTTQGGLIHIIANDFSHKRITSFFDDTQKIMNKFITFINAFSIGIGDAIANK ETMVQVQSSIENAKYQVEKLIERAQRNKLERLPGMSMKESFESQVNYILNKPRDISGTSA SKSLNFCNNMRTMVLAGSKGSFINISQVTACLGQQNVEGKRIPFGFNYRSLPHFSKGDYS GKSRGFVENSYVKGLAPEEFYFHAMGGREGLIDTAIKTAETGYIQRRLVKAMEDATVGLD RSVRGANGFIYQYEYGEDGFDATYLEMQKIKLTNFKDLHFVDMFADENYAIKKENVTEQI YKLLVTDLELQKVLYDEYDWLYKNALKYENQNIASPCNFKRIIDTAIFKFNCEKGDVSPY YILSSLQKLSESLFNRNLLLKLLVKINLSVKRILNEYKLSLEAFKWIIDEIKRKVNKSII APSEMVGTLAAQSVGEPATQMTLNTFHLAGVSANITMGVPRLKEIINVAKNIKTPCMKIY LQEPYNKTLEMAKKIQGDIEYSDIKSICEFSEIFYDPVVEDTLIEEDKDFVKSYFDFPDE NLDFLQMPKYIIRIIVDRSKLVSRGLKMDDLIACVHKAFPKKFHIISSDENARKLIIRFR CITPEDNNIDIYNVYYNKVINLKITGYNKIKKVYITEDKEQKNWFLQTDGVCLREIMSHP DICGHLVTSNDINEIVEVLGIEAARETILQELTLVIDGNGSYVNHRHISLLADVMTMKGY LTGITRHGVNKVGFGALKRASFEETVDILLDAAYAAENNVTKGITENIMMGQLAPLGTGI GDILLDVSKLEFAIPLSKPDYNYEDVDTPFIYSPVSESQSISSGNWSPAYLAEESKYSPK LSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS PSYSPTSPSYSPTSPSYSPTSLSYSPTSPSYSPTGYKKDKDKKNERKRRHEN NT seq 4839 nt NT seq  +upstreamnt  +downstreamnt atgtttgacgaaattgtaaaaaaaagaataacatcaattcagtttgggttattttctcca gaagaaattagaaaggctagtgttgtacaggtaatacacccagagaccatggagaatggg ttccctaaacctggtggtttaatagatttaaaaatgggtaccactgaacgtgcattttta tgttcatcatgcgagaaagataatttttcttgtcctggacactttggacatattgaactt acaaagcctatgtttcatgttggatacatgtctaagatcaaaaaaattttagaatgtgtt tgttattattgttctaaaataaaaattgataaaaaacacctaaaaaaggatttaaatttt gtatggaattcctgtaaaacgaaaagtgtttgtgagggagaattaaccgaggcaggtttt tcaggatgtggaaataaacagcctgttataaaaaaagaaggaatgggacttgttgcgttt atgaaaggtgaagaagacagtgatggaaaagttattttaaatggtgaaagggtgcataat attttaaagaaaatttctgatgaagattcaacatatttaggatttgatacaaaatatagt aaaccggattggcttgttataactgtacttcttgttcctccaccatcagttagaccatct attgttatggaagggatgcttagagcagaagatgatttgacacataaattggctgatata gttaaagctaacacgtatttaaaaaaatatgaattagaaggagcaccaggtcatgtgata agagattatgaacagttattacaatttcatattgctactatgattgataatgatttaagt ggacaaccacaagctttacaaaaaagtggaagaccaataaaatccattagtgctagatta aaaggtaaagaaggtcgtgttagaggaaatttaatgggaaaaagagtagattttagtgct agatctgtaattacaccagatgcaaatatttctttagaagaagttggtgtgccattagaa attgcaaaaatacacacttttccagagactattacaccttacaatattgaaaggttaact cggttggtgtccaatggaccaaatgaatatcctggtgcgaattacgtaatacgatcagat ggtcagcgaatagatctaaattttaacagaggggatataaaattagaagaagggtacatt gttgagagacacatgcaaaatggggatgtagtactttttaatagacaaccttcattacat aaaatgtcaatgatgggacatttcgttcgagttatggaaggtaaaacttttagattaaat ttaagttgtacgtcaccgtataatgcggatttcgatggagacgaaatgaatcttcatatg ccacagagttacaatactaaagcagaattagaagaattgtgtttggttagtaaacaagtt ctaagtcctcaatcaaacagacctgtaatgggtattgtacaggattctttaaccagtcta aggctttttacacttagagatactttttttgataaaagagaaacaatgcaattactttat tccataaacttaagcaaatatgaaaattttaataatgaagatatgcataaaacttctatt atggatttattaaattatccaacaatttcttatcctaagaaattatggacaggaaagcaa atctttagttatattttaccgaatattgtatattcagctgtgtctaatgaacacgatgaa aatgatcttgaaaatttaaaagatacagtagtaatcattcgtaatggagaacttttaagt ggtattatagacaaaaagtcagttggtactacacaaggaggattaattcatattattgct aatgattttagtcacaaaagaattacttctttttttgatgatacacaaaaaattatgaat aaatttataacatttattaatgcatttagtattggaataggagatgcaatagctaataag gaaactatggtacaagtacaaagttctatagaaaatgctaaatatcaagtagaaaaactt attgaaagagcacagagaaataaattagaaagacttcctggtatgtctatgaaagaaagt tttgaaagtcaagtaaattacattttaaataaacccagagatatttctggaacttctgct tctaaatcattaaatttctgtaataatatgaggactatggtacttgcaggatctaaagga tcttttattaatatttcacaagtcactgcatgtctaggtcagcaaaatgtagaaggtaaa agaataccatttggatttaattacagatcattgccacacttttctaaaggagattattct ggtaaaagtagaggatttgtagaaaatagttatgttaaaggattagcaccagaagaattt tattttcatgcaatgggtggtagagaagggttaattgacacagctataaaaactgcagaa acaggttatattcaaagaagacttgttaaagctatggaagatgcaactgttggtcttgat agatcagtaagaggagcaaatggttttatttatcaatatgaatatggagaagatggtttt gatgctacttatcttgaaatgcaaaaaattaaacttacgaattttaaagatcttcatttt gttgacatgtttgcggatgaaaattatgccataaaaaaagaaaatgtaacagaacaaatt tataaacttcttgtaacagatttagaattacagaaagttttatatgacgaatatgattgg ctttataaaaatgctttaaaatatgaaaatcaaaatatagcaagtccttgtaattttaaa agaataatagatactgccatttttaaatttaattgtgaaaaaggggatgtatctccgtat tacattttaagttcattacaaaaactttcagaaagtttatttaacagaaatttattacta aaattgttagtaaaaattaacttgtctgtaaaaaggatacttaatgaatataaattatca ttagaagcctttaaatggattattgatgaaataaaacgtaaagttaataaatctatcatt gcaccaagtgaaatggtaggaactcttgcagcacaatcagtaggggaacctgctactcaa atgactcttaatacattccatttggctggtgtatctgcaaatattacaatgggtgttcca agacttaaagaaattattaatgtagctaagaatataaagacaccttgcatgaagatttat ttacaagagccatataataaaacattggaaatggcaaagaaaatacaaggagatattgaa tattcagacataaaaagtatatgcgaatttagtgaaattttttatgatcctgtggtagaa gatacacttatagaagaagataaggattttgtaaaaagttattttgattttccagatgaa aatctagattttttacaaatgcctaaatatattattagaataatcgtagatcgttctaaa ttagtaagtagaggattaaaaatggatgatttgattgcgtgtgtacataaagcttttcct aaaaaatttcatattatttcatccgatgaaaatgctagaaagctcattattagatttaga tgtattacaccagaagataacaatattgacatttataatgtgtattataataaagtaatt aatttaaaaattactggatacaataaaataaaaaaagtttatataactgaagataaagaa caaaaaaattggtttttacaaaccgatggtgtgtgtcttcgagaaataatgtcacatcct gatatttgtggtcatttagtaacatctaatgatataaatgaaatagtagaagttttagga atagaagcagcacgtgagacaatcttacaagaattaacattagttatcgatggaaatgga agttatgttaatcacagacacataagtttattggcagatgttatgactatgaaaggatat ttaacaggaattacaagacatggtgttaataaagtgggatttggagcattaaaaagagct tcatttgaagaaacagtagatattttacttgatgctgcttatgcagcagaaaataatgtt actaaaggaattactgaaaatataatgatgggacaactggcccccctgggcacaggtata ggtgatattttacttgatgttagtaaattagaatttgccattcctttgtctaaacctgat tacaattatgaagatgttgatacaccatttatttatagtcctgtatctgaaagtcaaagt attagtagtggaaattggagtccagcatatttagcggaggaaagtaaatattcgcctaaa ttatctttattttctgtaggtagtccatcttacggttctgcatctccatcttacagtccg acatcgccatcttacagtccaacgtccccttcttacagtccaacatccccttcttacagt ccaacgtccccttcttacagtccaacatctccatcttacagtccaacctcgccttcttac agtccgacatccccttcttacagtccaacatcgccgtcttatagtccaacatcgccgtct tatagtccaacatcgccgtcttatagtccaacatcgccgtcttatagtccaacatcgccg tcttatagtccaacatcgccgtcttatagtccaacatcgccgtcttatagtccaacttcg ccatcttacagtccaacttctccgtcttacagtccaacttctccgtcttacagtccaaca tcgctgtcttacagtccaacgtctccgtcttacagtccaacaggatataaaaaagataag gataaaaaaaatgaaagaaaacgtcgacatgaaaattaa

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