Nitrosopumilus cobalaminigenes: C5F47_03565
Help
Entry
C5F47_03565 CDS
T06688
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ncl
Nitrosopumilus cobalaminigenes
Pathway
ncl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5F47_03565 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncl03021
]
C5F47_03565 (tfb)
Transcription machinery [BR:
ncl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C5F47_03565 (tfb)
Prokaryotic type
Archaeal type
TFB
C5F47_03565 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
OrfB_Zn_ribbon
zf-RRN7
Ribosomal_S27e
Zn_Tnp_IS1595
DUF4503
YacG
HscB_4_cys
RB_B
A2L_zn_ribbon
HMG_CoA_synt_C
HEF_HK
Prim_Zn_Ribbon
Lar_restr_allev
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QLH02697
UniProt:
A0A7D5R0S4
LinkDB
All DBs
Position
complement(608005..608916)
Genome browser
AA seq
303 aa
AA seq
DB search
MLKNTMMSGPKCPSCGDKKMVTDQNTGELFCSKCGLVVTDKIADTGAEWRSFSNDEGNKA
RTGAGTSLTMHDMGLSTVIGAANKDATGKPLSASVKSSIERLRTWDSRSQAHSSADRNLR
QALNEMDKLKDKLALTDAVIEKAAYIYRKAMEKKLVRGRSIQGLVAACLYASCRNTETPR
TLDDIAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIASIAQLSEKSKRKAIAI
LNQAKDIGMVAGKDPMGIAAAALYLACISTGEVKSQKDISIASGVTEVTIRNRCAGLRQM
LKD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaatacaatgatgtcggggccaaaatgcccatcatgcggtgataaaaaaatg
gtcacagatcagaacacaggagaattattctgtagtaaatgtggattagttgtaacagat
aaaattgcagatacaggtgctgaatggcggtcattttcaaatgatgaaggaaacaaagcc
agaacaggggcaggtacatccctcacaatgcacgacatgggattatcaacagtcattggt
gcagcaaataaagatgcaacaggaaagccactatctgcaagtgtcaaaagttcaattgaa
agattaagaacttgggacagtagaagtcaagcacattcttctgcagatagaaacttgaga
caagctctaaatgaaatggacaaattaaaagacaaacttgcgctaaccgatgcagtaatt
gagaaagcagcttacatttacagaaaagcgatggagaagaaattagttagaggtcgctcc
attcaaggattagtagcagcatgcctctatgcatcatgtagaaatacagaaacacctaga
actttagatgatatcgcaaaaggaatcaacattagaagaaaagatgtagccagatgttat
aggttgattttcagagaattggaattaaaaatgccagttgttgatccagttaaaggagtt
tcaagaattgcaagtattgcacagctcagtgaaaaaagtaagagaaaagcaattgcaatt
ttaaatcaagccaaagacatcggcatggttgcaggaaaagatccaatgggaattgcagca
gcagcattgtatcttgcatgtattagtacaggggaagtcaaatcacaaaaagacatttcc
atcgcatcaggagttacagaagtaacgattagaaatagatgtgcagggctaagacaaatg
ctaaaagattaa
DBGET
integrated database retrieval system
