Neobacillus cucumis: QNK12_06205
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Entry
QNK12_06205 CDS
T09078
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03410
Base excision repair
ncm03430
Mismatch repair
ncm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNK12_06205 (recJ)
03430 Mismatch repair
QNK12_06205 (recJ)
03440 Homologous recombination
QNK12_06205 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_06205 (recJ)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QNK12_06205 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QNK12_06205 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QNK12_06205 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WHY93084
LinkDB
All DBs
Position
complement(1273608..1275269)
Genome browser
AA seq
553 aa
AA seq
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MHWKPIDIPYENHPKRGYFYYCSRMFDLDPRLIHYLWLNGYKKEEQMINLLVPSIDKMYS
PFLLNDMDIAVDRILKALYQKEHIFIFGDYDTDGITSTTLLYKILIHLNGKVSFRLPLRK
EGYGLTANAVFELPTDVSLLITVDNGSSAHEAMKAAKQRGVDVIVTDHHEVLGPPPSCFA
FINPRRKDNTYPFPSLSGAGVALKVSQALYKRMGRRMDSVMSEAIELAALGTIADLMPMV
DENRIICWLGLRKLENHPLPLIKHLKDLLHISKVDSTTVGFTFGPIFNACGRISDPNIAV
KLLLKKNLTKEMVRKVIDLNEKRKEMTQLSFKIALDFIEGNQLHKDQVIVVNGSFHHGII
GILAGKIAESFQKPSIVISKDGVGSARSVNGTDFSIVAAIKECSEHLLKFGGHQAAAGFS
ITPDSNKIGEFRKVIQEIAKKQEIRDPLITYCFDLSINDVTDTFLNDLYSLEPFGINFPK
PIFFTSLNDITHFETFGRKQNHLKLFHSKKEIIGFDMANFLSQWKKSSKLEVLYTSHCMK
RKNILLKNLRIKE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcattggaaaccaatagatatcccttatgagaaccatcctaaaagaggatatttttat
tactgttcacgtatgttcgatttagatccccgtcttattcattatctatggcttaatggg
tataaaaaggaagaacaaatgatcaaccttctggtacctagtatagataaaatgtactca
ccctttttacttaacgatatggatatagcagtagaccgtattttaaaagcattgtatcaa
aaggaacatatttttattttcggtgactacgacactgatggcatcacaagcacaacactc
ctatataaaattctgatacatcttaacggaaaagtatcgttccgtcttccattaaggaaa
gaaggatatggactaacggcaaacgcagtttttgaattaccaactgatgtaagcttactt
atcactgtggacaatggctcaagcgctcatgaagcaatgaaagctgcaaaacaaagggga
gttgatgtgattgtaaccgatcatcacgaagttttgggaccacccccctcctgttttgct
ttcattaatccaagacgaaaagataatacatatccttttccatctttatcaggagcaggt
gttgctctaaaggtatcacaagctttatataaacgaatgggtcgaagaatggattccgtt
atgagtgaggcaattgagctagcagctcttggaacgattgccgacttaatgcccatggta
gatgagaaccgaattatttgttggcttggattaagaaagcttgagaatcatccgctccca
ttgattaagcatcttaaagatttattacacatctcaaaagttgatagtacaacagttgga
tttacttttggacctatttttaatgcctgtggaagaatttctgatccaaatattgccgtg
aaattgttgttaaagaaaaacctaaccaaggaaatggttaggaaagtcattgatttaaat
gagaaaagaaaagaaatgacacaactttcctttaaaatcgctttggattttattgaggga
aaccaattacataaggatcaagtaattgttgtcaatggttcattccatcatggaattatt
ggcatattagctggaaagatagcagaatcatttcaaaaaccgtccattgttatctcaaaa
gatggagtgggttctgcaagaagtgtaaatggaactgatttttccatcgttgctgccatt
aaagaatgtagtgaacatttattaaaatttggtggacatcaagccgccgcgggattttcc
attactcctgattcaaataaaataggcgaatttcggaaagttatacaagaaatcgcgaag
aaacaagaaattagagatccacttattacctattgctttgatttatctattaatgatgta
acagacaccttcttaaatgatttatattcattagaaccatttggaattaattttccgaaa
ccaatcttttttacatccttaaatgatattacgcattttgaaacttttggaagaaagcag
aatcatttaaaactattccatagtaaaaaagaaataattggcttcgacatggctaatttt
ttatcccaatggaaaaagagtagtaaattggaagttctatacacttcccattgtatgaaa
agaaaaaatattttgctgaaaaatttaagaattaaagaataa
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