Nymphaea colorata (blue-petal water lily): 116245683
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Entry
116245683 CDS
T07418
Name
(RefSeq) histone deacetylase 9 isoform X3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03082
ATP-dependent chromatin remodeling
ncol03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116245683
03083 Polycomb repressive complex
116245683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncol03036
]
116245683
Enzymes [BR:
ncol01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116245683
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
116245683
HDAC complexes
Sin3A-HDAC complex
116245683
BRAF-HDAC complex
116245683
REST complex
116245683
SHIP complex
116245683
MiDAC complex
116245683
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116245683
Heterochromatin formation proteins
Other heterochromatin formation proteins
116245683
Chromatin remodeling factors
NuRD complex
116245683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116245683
NCBI-ProteinID:
XP_031473050
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All DBs
Position
1:13612905..13619891
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AA seq
440 aa
AA seq
DB search
MDAVFSALSSWLFLIWCFSFSGDVGSVYFGPKHPMKPHRICMTHHLVLSYDLHKKMEIYR
PHKAYPVELAQFHSADYVEFLHRITPDTQHLFRNELAKYNLGEDCPVFDNLFEFCQIYAG
GTIDAARRLNNKLCDIAINWSGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDI
DVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDVKDIGEREGTYYAINVPLKDGIDD
SSFTRLFKTIIAKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHTECVRFVKKFNLP
LLVTGGGGYTKENVARCWAVETGVLLDTELPNDIPDNEYIKYFGPDYLLKIQHGNIENLN
SKSYLSTIKMQVLENLRCIQHAPGVQMQEVPPDFYIPDIDEDEQNPDERVDQHTRDKQIQ
RDDEYYDGDNDNDHNMEDGL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtcttttctgctctttcttcttggttattcttgatatggtgcttcagtttt
tcgggggacgttggaagtgtttattttggaccaaagcatcccatgaagccacaccgtatt
tgtatgacgcatcaccttgttctttcttatgatctgcacaagaaaatggaaatctatagg
cctcataaagcatatcctgtggagcttgctcaatttcattcagcagattatgttgagttt
ctgcatcgaataacaccagacacccaacatttattcagaaatgaattggcaaaatataat
ctcggggaggactgccctgtgttcgacaacctgtttgaattttgccaaatatatgctggt
ggcacaatagatgctgcacggaggctgaacaataaattatgtgatattgctataaattgg
tctggcggactacatcatgctaagaagtgtgaagcatctggtttttgctatatcaatgac
ttggtgctcgggatactagagttgctgaaatatcatgcccgggttctatacattgatatt
gatgtacatcatggtgacggagttgaagaagctttctattttacagatagggtaatgaca
gtaagcttccacaaatatggtgatttgttctttcctggaacaggtgatgttaaggatata
ggggaaagagagggaacctattatgccatcaatgtgcccctcaaagatggaatagatgat
tctagttttactcgtcttttcaagacgattattgccaaggtcgtggaaacatatcaacca
ggggtgatagttctccaatgtggtgctgattcacttgctggggaccgcttaggctgcttc
aacctctccattgatggccacacagaatgtgtaaggttcgtgaagaaattcaacttgccc
ctactggttactggaggtggaggatacacaaaggaaaatgttgcacgatgctgggcagtg
gaaacaggagttctcttagacactgaactccccaatgatattccagataatgagtacatc
aaatattttggtccagactacttgttgaagatccaacacggaaatatagaaaacttaaac
agtaaatcatacctaagcaccatcaaaatgcaagtactggaaaatttgcgttgcatacaa
catgctcctggagttcagatgcaagaggtgccccctgatttttatatcccagacattgat
gaggatgagcaaaatcctgatgagcgtgttgatcagcataccagagataaacaaattcag
agggatgatgagtactacgacggtgataatgacaatgatcacaacatggaagatggctta
tag
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