Neurospora crassa: NCU03380
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Entry
NCU03380 CDS
T01034
Name
(RefSeq) ATP-dependent rRNA helicase spb-4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncr03009
]
NCU03380
Enzymes [BR:
ncr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCU03380
Ribosome biogenesis [BR:
ncr03009
]
Eukaryotic type
Pre-60S particles
Helicases
NCU03380
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
3872974
NCBI-ProteinID:
XP_956827
UniProt:
Q873H9
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All DBs
Position
II:905281..907697
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AA seq
654 aa
AA seq
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MAPTQPQTKVRKPPRSWDALTPPLAQWILDYLSSMGFTQPTPVQKSCLELFRGNKDVVVE
AVTGSGKTLAFLIPVVEKLLRGEEPAKRNHVQGIIISPTRELATQIYNVLVSLVKFHEPS
AEAISHAKSDEKRPTATQPVVVPQLLVGGTTKAAEDLGTFLRLSPNLLIGTPGRLAELLS
SAYVKAPASTFEVLIMDEADRLLDMGFANELNRILGYLPKQRRTGLFSASLSDAVERLIT
VGLLYPHKITVRVKSLKDGGIIQERKTPMSLQMSYLVTPASQKMPAIVQLLEKLEPRPQR
SIIFFSSCMAVKYFSRILGAVLPAGFSVTSLHGKLEPKVREKNYERFVNTTSPMVLLTTD
LAARGLDIPQVDLVIQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQPGREEGYVQLLEV
RQTPITPLEKPAISVTPDEVERVSAAFRSQALADREIFQMAQLAFVSWTRSYIEHQASSI
FRIADLDWLDLAKGYGLLELPKMPEVREAKIDRSLGLGINTEEIPFKDKVREKKRQEELA
KWKEEKAKRAQEENTGDKRKKNEAWSGKAEQEETKLQRREKKRRKREAKKFSEMTEKEKE
EHLKLEQMIEEVRKRNEAKAAEERAAALAANPPKPKAPVKKVDDSDEEFGGFDD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctacccaaccacagactaaggtccggaagcctccaaggtcttgggacgctctc
acgcctcctctcgcccaatggattcttgactacctctcctccatgggctttacccagccg
actcccgttcaaaagtcatgccttgagctcttccgtggaaataaagatgttgtcgtcgag
gccgtaacaggcagtggaaagacacttgcctttttgattccggtagttgagaaactcctg
cgcggcgaagaaccagccaagcgaaaccatgtccaaggcattatcatctcgcccacccgc
gaacttgcaacccagatttacaatgtcctcgtttccctcgtcaagtttcacgaaccctcc
gctgaagccatttcccacgccaaaagcgacgagaagcgcccaacagcaacccagcctgtc
gttgtcccccaactacttgtcggaggcaccaccaaggctgctgaggatctcggtacattc
cttcgtctttccccgaatctcctaattggcactcccggccgtcttgccgaactcttgtcg
agcgcatacgtcaaggctcccgcgtctacatttgaggttctcattatggatgaggccgat
cgccttctcgatatgggtttcgcgaacgagctcaaccgcattctcggatatcttccgaag
cagcgccgtactggtcttttcagtgcttcgctcagtgacgccgttgaaaggctgattaca
gttggtctattgtacccacacaagatcaccgtcagagtgaagagtctgaaggacggtggc
ataattcaagagaggaaaacaccaatgtctctacagatgagctaccttgttaccccagcc
agccagaaaatgccagcaattgtccagctcctcgaaaagctcgagcccaggccccagcga
tccatcatcttcttctcttcatgcatggccgtcaagtacttcagccgcattctcggcgcc
gtcctgcccgccggtttttccgtcacctccctgcacggcaaactcgaacctaaagtccgc
gaaaagaactatgagcgtttcgtcaacaccacctcgcccatggtcctcctcaccaccgat
cttgccgcccgcggtcttgatatcccccaagtcgacctcgttatccagcacgacccgccc
acggacaccaaggttttcattcaccgctgcggtcgtgccggccgtgccggtcgtcggggt
ctcgccgtcgttctgctccagccgggtcgcgaggaaggctacgtacagcttcttgaagtc
cgtcaaactcccatcacgcccctggagaagcccgccatttccgtcacccctgatgaagtc
gagcgcgtctccgccgccttccgatcgcaagccctcgccgaccgcgagatcttccagatg
gcccagctcgctttcgtttcctggacgcgctcctacatcgaacaccaagcttcttccatc
ttccgcatcgccgacctcgactggctcgacctagccaagggctacggccttctcgagctg
cccaagatgcccgaagtccgcgaagccaagatcgaccgctctctgggtctgggcatcaac
acggaagaaattcctttcaaggacaaggtgcgcgagaaaaagcgtcaggaagagctggcc
aagtggaaggaggagaaggcaaagcgggcacaggaagagaatacgggcgacaagcgcaag
aagaacgaggcgtggagcggcaaggcggaacaggaggagacgaaactgcagaggcgcgag
aagaagaggagaaagagggaggccaagaaattcagcgagatgacggagaaagagaaggag
gagcatctcaagctggagcagatgattgaggaggtgaggaaacggaacgaggccaaggcg
gcggaggagagggcagctgcgcttgcggcgaacccacccaagccgaaggctccggtgaag
aaggtggacgatagtgatgaagagtttggtgggtttgatgattga
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