Neurospora crassa: NCU05523
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Entry
NCU05523 CDS
T01034
Name
(RefSeq) transcription factor tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ncr
Neurospora crassa
Pathway
ncr03022
Basal transcription factors
ncr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCU05523
09124 Replication and repair
03420 Nucleotide excision repair
NCU05523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncr03021
]
NCU05523
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU05523
Transcription machinery [BR:
ncr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCU05523
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCU05523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
3876607
NCBI-ProteinID:
XP_960485
UniProt:
Q7S6R6
LinkDB
All DBs
Position
VI:complement(1625485..1627756)
Genome browser
AA seq
501 aa
AA seq
DB search
MSLGGQQLLEYLEKLPGTAFRRLYQSPATALAIFRRMLSYHAKVIVRGLLYMPDPFPLTS
LDIWFPPEGGGKIHRDRTIAALRSLHILQVSPPSKDRTQEIQITASFKKGLQLAFEGGGE
DGSFGVPSSLPVDPSIDIAYLDRYARKKWDDILHYVVNSLGVHGSSEGVSGPKASVKELL
LAGRLVERRPDTRTGIGITQAGFTFLLQESNAQVWTLLLLWLEAADHTADSGMDSIDMLS
FLFMLSSLELGTAYDTSALTETRRNMLPSLVDFGLIYFPRDTRQFFPTRLATTLTSTASA
LRTVSSAFTAATANPSGEPGTTTSTSGGPAATPDKTQTAAKGIIIETNYRIYAYTTSPLQ
IAVLALFCQLNMRFPNMVSGRLTRDSIRQAIGFGITADQIISYLHAHAHQQMVREATVTG
KPVLPPTVVDQIRLWQLENERMQTTAGFLFKDFESTEEYAALSRYAEEIGVLVWKNDKRQ
LFFASKHEQLRDYLKSRKKGE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcggcggacaacagctcctcgagtacttggagaagctgccaggtacagctttt
aggagactgtaccagtcaccagcgacagctttggccatcttccgccgtatgctgtcttat
catgccaaggttattgtccgaggtctactgtacatgcccgacccattcccgttaacctcc
cttgacatatggttccctccagagggcggcggaaagatacatcgcgatcgcaccattgcc
gctctccgatccctccacatcctacaggtctcaccaccaagcaaggaccgaacccaagaa
atccaaatcacggcgagcttcaagaaaggcctacaactagccttcgaagggggcggcgaa
gatggcagctttggcgtccctagttctcttcccgtcgatccctccatcgacatcgcctac
ctggacaggtacgctcgtaagaagtgggacgacatcctccactacgttgtcaacagtctt
ggggtccacggcagctcagaaggggtcagcggacccaaggccagtgtgaaggaactactc
ttggccggacgcctcgtcgaacgacgtccagacacccgtacaggaatcggaattacgcaa
gccggtttcaccttccttctccaggagtccaacgcccaagtatggacgctcctcctcctc
tggctcgaagcagccgaccacacggccgactcgggcatggacagcattgacatgctctcc
ttcctcttcatgctcagctcgcttgagcttggaactgcctacgatacttcggccctgacc
gagacgcggcggaatatgcttccctcgctcgtcgacttcgggctcatctacttcccgcgc
gacacgcgccagtttttccctacccgcctggccaccacactgaccagtaccgcctcggcc
ctgcgcaccgtctcctcggctttcacggccgcaaccgccaacccctcgggcgagcccggc
accacgaccagcaccagcggcggccccgccgccacccccgacaaaacacagacagcagcc
aagggcatcatcatcgagaccaactatcgtatctacgcctacaccacctccccgctacaa
atcgccgtcctggctctcttctgccagctcaacatgcgtttccccaacatggtctcgggc
cgcctaacccgcgactccatccgccaagcaatcggcttcggcatcaccgccgaccaaatc
atttcctacctacacgcgcatgctcatcaacaaatggtgcgcgaagccacggtcacgggt
aaaccggtgcttcccccgacggtggtggaccagatcaggctttggcagctggagaacgaa
aggatgcagaccacggcgggcttcttgttcaaggactttgagagcacggaggagtacgcg
gcgctgagcaggtatgcggaggagattggcgtactagtgtggaagaatgataagaggcag
ctcttttttgccagcaagcatgagcagttgagggattatttgaagagtcggaagaagggg
gagtaa
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