KEGG   Neurospora crassa: NCU06481
Entry
NCU06481          CDS       T01034                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ncr  Neurospora crassa
Pathway
ncr03030  DNA replication
ncr03410  Base excision repair
ncr03420  Nucleotide excision repair
ncr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCU06481
   03410 Base excision repair
    NCU06481
   03420 Nucleotide excision repair
    NCU06481
   03430 Mismatch repair
    NCU06481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncr03032]
    NCU06481
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU06481
Enzymes [BR:ncr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NCU06481
    6.5.1.6  DNA ligase (ATP or NAD+)
     NCU06481
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NCU06481
DNA replication proteins [BR:ncr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NCU06481
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NCU06481
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NCU06481
   NER (nucleotide excision repair)
    Other NER factors
     NCU06481
   MMR (mismatch excision repair)
    Other MMR factors
     NCU06481
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C MctB
Other DBs
NCBI-GeneID: 3873294
NCBI-ProteinID: XP_957121
UniProt: Q7RYJ3
LinkDB
Position
III:complement(1558567..1562937)
AA seq 923 aa
MPPKQQQTLGKFFGKADAPAGGKQQTKLSFGTKATSTTSSKTKEEPKKDEIAGEDGGHEE
VEKKVEEMKIKDKSPAKTGRGRGRPAKGKEVAKEVAKEKSSAEEDEDVMEVVEEVKEETG
NKKKRSRSPTTKSPKSKKAKTEEDSEDVAPASKRSRRSRKVVEDDEDETMEDVPASSAPV
KEEKSKKAASPKPALKKKSSSPAPVEKANDAEASSASASEIEAEEEDEDEKTEAVAKEAR
KVIQTTLATKVKDPYPDWKAGEPVPYAALCTTFSLIEQTRKRLLIMEYCSLFLRQVLRLT
PDDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSIAVVKNDQKEIGDLGLVA
VKSRSKQPTMFKPKPLTIRGVHKGLMDIATTMTGTGAQQKKVDGIKKLLSAADANSTGKV
DITKDKGGPSEAKFIVRFLEGKLRLGLAEKSVIVSLAQAMIAHEFAQKGKIPSESDFSKA
ESILKTVYSELPSYDVIIPAMLQHGIMNLREHCKLRPGVPLKPMLANPTKAITEVLDRFE
GQTFTCEYKYDGERAQIHYVAKDVPKSEGDLSQVASKDTGKGVAAIFSRNSEDLSQKYPD
VLAKLPTWVKEGTKSFVLDCESVAWDTVDKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAF
DLLYLNGQAVVEKSLRERRELLREAFKPVEGEFAFATSMDGQELDEIQSFLDESVKAGCE
GLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFL
LACYNPSTDTYETVCNIGTGFSDEVLQELHSSLSPIIIDRPKPFYAHSSGGQHQPDVWFE
PKYVWEVKTADLTLSPRYKAGMKEGVDPSGEKGISLRFPRFIKVRDDKKPDEATTSRMVA
EMYRKQESVGKNKGPAVDDNFEY
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgcctcccaagcagcagcaaacgttgggcaagttcttcggcaaggcagacgccccggcg
ggcgggaaacagcagacaaaattgtcttttggcacgaaagcgacgtcgacaacatcatcg
aagacgaaggaagaacccaaaaaggacgagattgccggcgaagatggggggcatgaagag
gtagagaagaaggtggaggagatgaagatcaaggataagagtcctgccaagacggggagg
gggaggggaaggccggctaaggggaaggaagttgctaaggaggtagctaaggagaaaagc
agcgcagaggaggacgaggatgtgatggaggtcgtggaggaggtgaaggaggagacaggc
aacaagaagaaaaggtcacggtcaccgacgaccaaaagccctaaatcgaaaaaggccaag
accgaggaggactcggaggatgttgcgcctgccagcaagcggtcgaggagaagtcgcaag
gtggttgaagacgacgaggacgaaaccatggaagatgttcccgcgtcttctgcgccggtg
aaggaggagaagagcaaaaaagcagcatcacccaagccggcactaaaaaagaaaagttcc
tctcccgcaccggtagaaaaggcaaatgatgcggaggcatcctcagcatccgcatccgaa
atcgaagccgaagaggaagacgaggacgaaaagaccgaagcagttgccaaagaggcccgc
aaggtcatccagaccacactcgcaaccaaggtcaaggacccctacccggactggaaggcc
ggcgaacctgttccttatgccgccctctgcacgacgttttcgctcattgagcagacgcgg
aagagactactcatcatggagtactgctctcttttcctgcgccaagtcctccgtcttacg
cccgacgatctgctgcctaccgtcctgctcatgatcaacaagcttgcgccggattatgca
ggtatcgagctgggtattggcgagtcgctcatcatgaaggctatcggcgagactacgggc
cgtagcatcgctgttgtcaagaacgaccagaaggaaattggtgatctggggctggtggct
gtcaagtcgaggtcaaagcagccgaccatgttcaagcccaagccgttgaccattcgcggt
gtgcataaagggttgatggatatcgctacgactatgacgggcacaggtgcccagcagaag
aaggtggatggtatcaagaagcttttgtctgctgcggacgcaaattcgactggcaaggtg
gacatcaccaaggacaagggcgggcccagcgaggccaagttcatcgtccggttcctagag
ggtaagttgcggttggggctagcagagaagtccgtcattgtctccctggcgcaagccatg
attgcacacgagttcgcccaaaaggggaaaatccccagcgaatccgactttagcaaagcc
gagtcgatcctcaagactgtctacagcgagttgcccagctacgacgtcatcatccccgcc
atgctccagcacggcatcatgaacctccgcgagcactgcaagcttcgcccgggcgtgcca
ctcaagcccatgctggctaacccaaccaaggccatcaccgaggtgctcgatcgcttcgag
ggccagacgttcacgtgcgagtacaagtacgacggcgagagagcgcagatccattacgtg
gccaaggacgtgcccaagagcgaaggcgacctcagccaggtcgctagcaaggacactggt
aaaggtgttgcggctattttttcacgcaactcggaggatttgtcccagaagtacccggat
gtgctcgcgaagctgccgacctgggtcaaggaaggcaccaagagttttgtgctggattgc
gagtccgtggcgtgggacacggtcgataagaaggtgttgccgttccagcagctgatgacg
cggaagaagaaggacgtcaagctggaggatgtcaaagtcaaagtgtgcgtgtttgcattt
gacttgctgtatctgaacggccaggcggtggtggagaaaagtctgagggaacggagggag
ttgttaagagaggcgttcaagcctgtggagggcgagtttgcatttgcgaccagcatggat
gggcaagagctggatgagatccagtctttcctggatgagtctgtgaaggcgggttgtgaa
gggttgatggttaagatgttggatggcgcggagagtggatatgagccatctaaaaggagt
cggaactggttgaagatcaaaaaagattacctagccggcataggcgactcgctcgacctt
gtcgttcttggcgcctaccacggcaaaggcaagcgcacctccgtctttggcgccttcctt
ttggcctgctacaaccccagcaccgacacctacgaaacggtctgcaacatcggcacgggc
ttctccgatgaagttctacaggaactccactcttctttatcgcccatcatcatcgaccgg
cccaagcccttttacgcgcactcctcgggtgggcagcaccagccggatgtctggttcgaa
ccgaaatacgtgtgggaggtcaagacggccgatctgacacttagcccgaggtataaggcg
ggcatgaaggaaggggtggacccgagtggtgagaagggcatttctctcaggttcccgagg
tttattaaggtcagagatgataagaagccggatgaggcgacaacgagtaggatggtggct
gagatgtataggaagcaggagagcgtggggaagaataagggaccagctgttgatgataat
tttgagtattag

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