Neurospora crassa: NCU09438
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Entry
NCU09438 CDS
T01034
Name
(RefSeq) translation repressor/antiviral protein Ski3
KO
K12600
superkiller protein 3
Organism
ncr
Neurospora crassa
Pathway
ncr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCU09438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU09438
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
NCU09438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_8
TPR_1
TPR_14
TPR_17
TPR_22
TPR_16
TPR_11
TPR_12
TPR_6
TPR_7
TPR_9
TPR-S
ChAPs
E_motif
TPR_15
DUF5588
Hemocyanin_N
Motif
Other DBs
NCBI-GeneID:
3874737
NCBI-ProteinID:
XP_958590
UniProt:
Q7S1X7
LinkDB
All DBs
Position
VII:193052..197941
Genome browser
AA seq
1444 aa
AA seq
DB search
MSTKQLVKAAAEAIKKQQWDDAIEGAKNIIDKDSKSYQGHILLAFALDKKGRLEEAENTY
LAATRLKPEEKEAWQGLVKLYPNLDTSKKFKQHQHAVLKLAEIFRDANDLQKCYETVDSF
ITYARNKAESYQYVDALDLILPGSPIYDAIEGRFGHVWRTYETQAKLVEQNEKKRINTLI
GERRTRIGARINEVTLEVKREVYRQSRLSYTYAQLINWTNDDEVRRMYEEKLIQYCHDRL
MAWPPGEEKEQELANVLKLANDMVIIKHPYKLAWDIAINWQDHKEIKEWDVTVLRQYCTF
FPDSDLNRVVMGFLTSSVSPFPQEKQEQTTEDAAAKSEGSTEESEDDEDGGAATIYAPIT
EEDRLLMMTEGISGAESLLAFRLMGEYYQHLEEWESNVELMRKALTFLKEERAKTGLDFR
FTEDAFSLYLGTALVFYQTPRNHQEAKALFDAVLTHDPTSTPAMIGVGLIYEEEEEYDEA
IDFLERALKRDPNNIRVRTEAAWVKALKGDFDMARAELEACIPILSKKGQSKELLSQTQY
RLGYCIWNIDTSKAARKDRSGAYALFLESLKNNLNYAPAYTILGIYYADYAKDKKRARRC
FQKAVELSPSEVESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFA
ALGVAELNKQEFHKAIVSFQSALRISPNDYHSWVGLGEAYHSSGRYIAATKAILNAQKLE
ESSEANLTGETWFTKFILADIKRELGDFDESIELYQRVIQERPDEEGVATALMQTLVDNA
FDSLNKGFFGKAAGLATETLTFATKAPDAIKDTFNYWKAIGDACSLFSNIQGRISEFPAE
TVSSLLGTDEDFPAYQILKDIDNVGTGIVSTDGVFPENETVGVDLTKALQATLLAHKRSI
HIASNDIHAQSVAYYNLGWAEYRAHACLPPDIRKNSHKKPTNYIKAAMACFKRAIELEAG
NSEFWNALGVVTSEVNPAVAQHAFCRSLFLNERGAHVWANLATLALAQGDLALANEAFTR
SQSTDPDYSLAWLGQGVVALLTGNEKDARGLFTHAMEISGDTSRVISQRYAVSMFDHILS
FSSSESLPTTSLIQPIFALTQLQSLHSSASSSTDLAYNHLLALFLERTGETPRAISILDS
LSTTLEQEYETTESPLALKHFAIVKSDLARLQLSARLFNEAIDSADLALQLSSDESADEL
TAEERRKLRLSAHVTLGLAHYYSHDITAAVTAFDQALSESNTNPDVACLLAQILWATGQE
DARERGRDLLFGVIADSEERKEQHVQSVLLLGVIALLDNDAESMDAVVSELQSLRSSDEG
ISPEQQAQLGEVLRAILTAMGSGEAQPMTDVMLHPFLPHGWSRVAQLAAQHGGEEEAEGA
SEMALRVARKGVPPRGELSPEDLARAYAGTGRPADAQVGCVVAPWERRGWESLGDAVTAV
AAKQ
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaacagctcgtcaaggcggctgccgaggccatcaagaagcagcagtgggac
gacgccatcgagggcgcaaagaacatcatcgacaaggacagcaagagctaccagggacac
atcctcctggcctttgctctcgacaagaaggggcggctcgaagaagcagagaacacatac
ctcgccgccaccagactcaagccagaagaaaaggaagcgtggcagggcctcgtcaagctc
tacccaaacctcgacacctccaaaaagttcaagcagcaccagcatgccgtcctcaagctc
gccgagatcttccgagacgcgaacgacctccagaaatgctacgaaaccgtcgacagtttc
atcacctacgcccgcaacaaggccgagtcataccaatacgtcgacgccctcgacctaata
ttgcccggatctcccatctacgacgccatcgagggccgcttcggtcatgtatggaggaca
tacgagacacaggccaagctggtcgagcaaaacgagaagaagcgcatcaacaccctgatc
ggcgagaggaggacgcgcatcggcgcaagaatcaacgaggtcaccctggaggtcaagcga
gaggtctacagacagagcaggctgagctacacctacgcccagctcatcaactggaccaac
gacgacgaagtgcgccgcatgtatgaggagaagctgatccaatactgccacgaccgtctg
atggcctggcctccaggagaggaaaaggagcaagaactggctaatgtcctgaagctcgcc
aacgacatggtcatcatcaagcacccctacaagctggcctgggatatcgccatcaactgg
caggaccacaaggagatcaaggagtgggatgtcacggtgctcagacagtactgcactttc
ttccctgatagtgatctcaacagggtggtcatgggcttcttgaccagcagcgtctctccc
ttcccacaggagaagcaggaacagacgacagaggatgcggcggccaagagtgagggcagc
acggaagagagcgaggacgacgaggatggaggcgcggccaccatctatgctcccatcacc
gaggaagaccgtcttcttatgatgacagagggtatcagcggtgccgagtcactgttggcg
ttcagactgatgggcgaatactaccagcatctggaagaatgggagagcaatgtcgagctg
atgcgcaaggcgttgacgttcctaaaagaggagcgggccaagacgggactggatttccgc
tttaccgaggacgccttttccttgtatctcggcacggctttggtcttttaccagactccc
cgtaaccaccaggaagccaaggctcttttcgatgcggtactcactcacgaccctacctcc
acccctgccatgattggtgtcggtctaatctacgaggaggaggaggagtacgatgaagcc
attgacttccttgagcgggctttgaagcgtgatcccaataatatccgggttaggaccgag
gctgcttgggtcaaagcactcaaaggagactttgacatggccagagccgagctggaggcc
tgcattcccattctttccaaaaagggtcagtcgaaggaactcctatcacaaactcagtac
cgccttggttactgcatctggaacatcgacacctccaaggctgcccgaaaggacaggtct
ggagcttatgccttgttcctggagtcactcaagaacaacctcaactatgccccggcttac
accatcctcggtatctactacgccgactacgccaaggacaagaagagagcgcgcagatgc
ttccaaaaggcagtggagctttcgccatctgaggtcgagtctgctgagcggctagctaga
tcctttgccgatgacggagactgggaccgcgtcgagctcgttgcccaaagagtcgtcgac
tctggcaaagtcaaacccccacctggatccaagcgcaagggtataagctggcctttcgcc
gctctcggtgtggccgagctcaacaagcaagagttccacaaggccattgtgtccttccag
tcggctttgcgtatttctcccaatgattaccattcctgggtgggtttgggtgaggcatac
cacagctctggtcgctacattgccgccaccaaggccatcctgaacgcccagaagctagag
gaatcttctgaagcgaacctcaccggagagacgtggttcacaaagttcatcctagccgac
attaagcgcgagctgggtgactttgatgagtccatcgagttgtatcaacgtgtcatccag
gagcggccggacgaagaaggcgtcgccactgccctgatgcagacactcgtcgacaacgcg
tttgacagtctgaacaagggattctttggcaaggctgccggtctggccaccgagacactc
acctttgccaccaaggctcctgatgccatcaaggacaccttcaactactggaaggccatc
ggtgacgcttgctccttgttctccaacatccaaggccgcatctccgagtttccggctgaa
accgtttcctcgctcctgggaaccgacgaggacttccccgcctaccagatcctcaaggac
attgacaacgtcggtactggcatcgtctccaccgacggcgttttccccgagaacgagact
gtgggcgtagacttgaccaaagccctccaggccacccttcttgcccacaagcgctccatc
catatcgctagcaacgatatccacgcgcagtccgtggcttactacaacctcggctgggcc
gaataccgcgctcacgcctgtctgcctccggacatccgtaagaacagccacaagaagccc
accaactatatcaaggccgccatggcctgcttcaagcgcgccatcgagctggaggctggc
aactccgagttctggaacgctttgggtgtcgtaacctctgaagtcaacccagccgtagct
cagcatgccttctgccgctcgctcttcctgaatgaacgtggcgcccacgtctgggccaac
ctggctactttggcgttggcacagggcgatcttgcgctcgccaatgaagcattcacacgg
tcccagtcgacggacccggattactcgcttgcttggctggggcagggtgttgtggcactg
ttgacagggaacgaaaaggatgcgaggggtttgtttacgcacgccatggagatctcgggc
gatacctcacgggtcatcagccagagatacgcagtctccatgttcgatcacatcctttcc
ttctcatcctccgagtctctccccaccacgtccctaatccaacccatcttcgccctcacc
caattgcaatcccttcactcctctgcttcgtcctctaccgacctggcctataaccacctc
ctcgctctcttcctcgagcgcactggcgagactccgagagctatctccatcctcgactcc
ctctccaccactctcgagcaagagtacgaaaccaccgagtcgcctctagccctcaaacac
ttcgccatcgtcaaatccgatctcgcccgccttcagctgtccgctcgtctcttcaacgaa
gcaatcgattccgccgacctggcactccaactatcctccgacgagtccgccgacgaacta
acagccgaagaacgccgcaagctgcgtctctctgcgcacgtcacactaggtctagcgcac
tactactcccacgacattaccgccgcagtcaccgccttcgaccaggccctctccgagtcc
aacaccaaccctgacgtcgcctgcctgctggcgcaaatcctctgggccacgggtcaagaa
gacgctcgcgaacgcggtcgggatctcttgtttggcgtgattgcggactcggaggaaaga
aaggaacagcatgtccagtccgttttgctgctaggcgttattgccctgctggacaatgac
gcagagtcaatggatgccgtggtgtctgaactccaatctctccgctctagtgacgagggg
attagcccggagcagcaggcgcagttgggtgaagttttgagggcgatcctcactgcgatg
gggtcaggagaggcccagcccatgacggatgtcatgttgcatccgttcttgccacatggt
tggtcgagggttgcgcagttggctgcccagcacggaggagaggaggaggcagagggagcg
agtgagatggcgctgagagtagcgaggaagggagtgccgcctaggggagaactgagtccg
gaggatctggcgagggcgtatgcgggcacgggaaggccggcggatgcgcaggtgggctgc
gtggttgcgccttgggagcggagggggtgggagagtttgggggatgcggtcacggctgtt
gcggcgaagcagtag
DBGET
integrated database retrieval system
