Naumovozyma castellii: NCAS_0D02650
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Entry
NCAS_0D02650 CDS
T02233
Symbol
NCAS0D02650
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NCAS_0D02650 (NCAS0D02650)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncs03400
]
NCAS_0D02650 (NCAS0D02650)
Enzymes [BR:
ncs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCAS_0D02650 (NCAS0D02650)
DNA repair and recombination proteins [BR:
ncs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NCAS_0D02650 (NCAS0D02650)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
DNA_ligase_A_C
LIP1
Motif
Other DBs
NCBI-GeneID:
11529937
NCBI-ProteinID:
XP_003676207
UniProt:
G0VE55
LinkDB
All DBs
Position
4:508606..511458
Genome browser
AA seq
950 aa
AA seq
DB search
MSQQIQLSQEPPPVMTPCNFSPSPAFQWLCDELFVKLEDIQSKRDPKNIGKPVTVRYYEV
INHFIALWRKTVGNDIFPALILILPYRDRRLFNIRDYTLIKAICAYLKLPRNSFTEKRLL
SWKARAGKGVKLSQFCVNEIKKRKSEPKDKIEITIDRLNECLDKLAEERNSKGRGFKKLA
DSPTFKFCLENMSFIELQFFFDILLKNRVIGGQEHKFLNAWHPDAQDYLSVVSDLRTVTT
RLWDPEIRLQNNDLVINPGFAFAPQLAKKLSISYEKICMKLKNDFIIEEKMDGERIQLHY
QDYGEKLKFFSRRGTDYTYLYGESIHDGFIGKHLKLNKDVKDCILDGEMITYDKTQNMIL
PFGLVKSSARSMLTKDGIMNEGYQPLFMVFDLIFMNGTSLANIPLNVRKEYLNGIFTPEP
HIIELLSSYHRFNEDSIRKSLELAISMGSEGIVLKRYDSRYTVASRNDDWIKVKPEYLEQ
FGENMDLIVIGRDPGKKDSLMCGLAVVEEDEKADLNENNDDNVIILDDDEDAPVEQERTI
HKFVSFCVIANGLSQEEFKQIDRKTRGLWNRSDEIPPPDTLLQFGTRLPIEWIDPKKSVV
IEVKARSIDAAESNGRKFATGCTLYGGYCRGIREDKDWQTCYTLSEFLRTKNVKSRRNGS
DQVIHGVKRQKKNRRKYILDQSLEEEGGLLKNTAFFRNLYFYVISDVFDDVLGTRIEKER
MYKYIQEGGGTLIHNIISKQFGTRNLRIISGKLTNECSALIERGYDVINPQWIVDCVQSK
SLLKLEPKYCFNVSTELKKLTEKRVDTFGDSYEVPITEEQLSTLLETELNLVRVQGLVTP
YADEELIKIPLFLFQDRIMLFPNTESKTISFLQEKIKLYGGKLTTDIGKCNLIILPNGNQ
QLLQRTRDLLTKNIMNSGEVPTIPYIVNPLWIERSIEENSQVPEEDYPVI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaattcaattatcgcaagaaccgccaccggtgatgacaccatgcaatttc
tcaccatcgccagcattccagtggttatgtgatgaactatttgtcaaattagaagatatt
caaagtaaaagagaccctaaaaacattggtaaacctgtgactgtacgatactatgaagtt
attaatcatttcattgcgttatggaggaaaactgtgggtaacgatatcttcccagccctt
attctaattttgccctatcgtgatagaagattgtttaacattagagattataccttaatt
aaggccatttgtgcgtatctgaaattacctagaaattcatttactgaaaagagattgcta
agttggaaggctagagctggtaaaggtgttaaattgtctcaattttgcgttaatgaaatt
aagaagaggaagagcgaaccaaaggataaaattgaaataaccattgatcgtttgaatgag
tgtctggataaattagctgaggaaagaaatagtaagggtcgagggtttaaaaaattggct
gattctccaacgtttaagttctgcctagaaaacatgtcatttattgaattacaattcttt
ttcgatatattgttgaagaatagagtcattggaggccaggaacataaatttttgaacgct
tggcatcctgatgctcaagattatttaagtgtggtaagcgacctaagaactgtgacaaca
cggctttgggaccctgaaattagattacaaaataatgacttggtcattaacccaggattt
gcattcgcaccacaattggctaagaaattatccatttcatatgaaaaaatatgtatgaag
ttaaaaaatgatttcattatcgaggaaaagatggatggggaaagaattcaattacattat
caagactatggagaaaaattaaaattctttagtaggcgtggtacagattatacatatctg
tatggtgagagtatacatgatggattcattgggaaacatttaaaactgaataaagacgtt
aaagattgcatattagatggtgaaatgatcacttatgataaaacccaaaatatgatttta
ccatttggattagtcaagagtagtgcaaggagtatgttaacaaaggatggaataatgaat
gaaggatatcagcctctgtttatggtattcgatctgatatttatgaacgggacatcactt
gcaaatattccattgaatgtacggaaggagtacctaaatggtatctttaccccggaacct
catatcatagagttactatcttcatatcataggtttaacgaagattcgatcagaaaatct
ttggaacttgcaatttctatggggtcggaaggtatagttttgaagagatatgattccaga
tacactgtggcaagtagaaatgacgattggatcaaagtgaaacccgaatatctggaacaa
tttggtgagaatatggatttgattgtaattggaagggatcccggtaagaaagattcgcta
atgtgtggtttggccgtagttgaggaagatgagaaagcggacctcaacgagaataatgat
gataatgttataatcttagatgatgacgaagatgccccagttgagcaagaacgaaccata
cacaaatttgtttcattttgtgtcattgcaaatggactatctcaggaggaatttaagcaa
attgatagaaaaacaagaggactatggaaccgatcagatgaaattccaccaccagatacg
ttattacaatttggaacaaggttgcccattgaatggattgaccccaaaaaatcagttgtc
attgaagtcaaagcgagatcgatagatgctgcggaatccaatggaagaaaatttgccaca
gggtgcactttatatggtggatattgtagaggaatacgtgaagataaagattggcaaaca
tgctatacgttgtcggaatttcttcgaacgaaaaatgttaaatctagaaggaacggatca
gaccaggttatacatggagtaaaacgacaaaagaaaaatcggaggaagtacatattggat
cagtcattagaagaggagggaggtcttttgaaaaataccgcattcttcagaaatctatac
ttctatgttatctcagatgtctttgatgacgtattgggtactaggatagaaaaggaaaga
atgtataaatacatacaggaagggggtggaactttaattcataatataatatccaaacag
tttggaaccagaaatttaagaattatatctggtaaactaacgaatgaatgcagcgctttg
attgaaagaggatatgatgttataaatccacaatggatagtagattgtgtgcagagtaag
tcgctattaaagttggaaccaaaatattgttttaacgtatctaccgaattaaaaaaattg
acagaaaaaagagtagatacttttggagatagttacgaagttcctattacggaagaacaa
ctttctactttgctggaaactgagttgaatctggttagagtgcagggtcttgtcactcca
tatgcagatgaagaacttattaagatcccattatttcttttccaagatagaattatgtta
tttccaaatacggaatcaaaaacgataagttttcttcaagagaaaatcaaattatatgga
ggtaagttaacaactgacatcggaaaatgtaatctaataattcttccaaatggtaatcaa
caacttttacaaagaacaagagatttgttgacaaagaatattatgaattctggggaagtt
ccaacaattccatatattgttaaccctctatggattgaacgatctattgaagaaaactcc
caagtaccagaagaggattatccagttatttag
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