Naumovozyma castellii: NCAS_0H01280
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Entry
NCAS_0H01280 CDS
T02233
Symbol
NCAS0H01280
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ncs
Naumovozyma castellii
Pathway
ncs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCAS_0H01280 (NCAS0H01280)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncs03041
]
NCAS_0H01280 (NCAS0H01280)
Enzymes [BR:
ncs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCAS_0H01280 (NCAS0H01280)
Spliceosome [BR:
ncs03041
]
Complex A
U2 snRNP components
U2 related factors
NCAS_0H01280 (NCAS0H01280)
Complex B
NCAS_0H01280 (NCAS0H01280)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Fis1_TPR_N
Motif
Other DBs
NCBI-GeneID:
11525325
NCBI-ProteinID:
XP_003677787
UniProt:
G0VIW1
LinkDB
All DBs
Position
8:complement(243749..246412)
Genome browser
AA seq
887 aa
AA seq
DB search
MIPINSEDSSHDEPPNGGKITEKQRLLQERREKLAKWKQKKTQQDLEKKKPVTNVETNLP
LAAKDKFAERTSKLEEWKRKKRERDAERKLQDQKSVASTEEKQQNIVSKKRKKKKQTILF
GDDVDESKEEASSNIQTTNESLTEIYKPSSIDLAPVRHHSNIDSKKPDPLDEFMNSLGNS
SANSTSFEGRTIAGDLLDAEDESLMTGISHEKPSTDDGVENSRYTKLAKLKAKKKVTEVL
YDKSTLEPFQKNFYAEPEDIKQMSDSEIEELRLSLDNIKVKGTNCPLPITRWSQLGLNTD
TMNLITKNLRYETLTPIQSQAIPAIMSGRDVIGISKTGSGKTISYLLPLLRHIKAQRPLS
KNETGPLGLILAPTRELALQIHDEIERFIVHDENIRSICCTGGSELKKQINDLKRGVQIV
VATPGRFIDLLTLNTGKLVSTERITFVIMDEADRLFDLGFEPQITQIMKTIRPDKQCVLF
SATFPNKLRNFAMRILNSPLSITINSNNLVNENVEQKVAICETDSAKFQELLTILQNQNK
QQDQCENDEDEEREDETTLDKKTIIFVASQQICDLLYSQLVNFGYSLFAIHAGKPYQERI
TNLEGFKNTKNSILICTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTARGNLHGIA
ITLLLPSELTAGYILFKAMRANEKEKHDPFIIETLQGMAEEFEKGMKVGKYRLSKGFGGK
GLDNLENKREEKQTEERRKYSPANTGTSDASKGKTNLEEGGEVTQDTNSIEIPKLEYAIL
QNKNPDGSITFSADVNVNDLPQLVRWEATKNTTLMFIKHETGCSITNKGKYYPEGKSPST
DKDEPKLYLLIESKDEKDIRLSIELLEEKVREGIRKVEYQTLKSNKY
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgattcctattaattcagaggattctagtcatgatgagcccccaaatggtggaaaaatc
accgagaaacaacgtctcttgcaagagagacgagagaaattagcaaaatggaaacaaaag
aagactcaacaggatttagagaagaaaaaacccgttactaacgtagaaacaaatttgcca
ttggctgctaaggataaatttgctgaaagaacaagtaagcttgaagaatggaagaggaag
aaacgtgaaagagatgcggaaaggaaacttcaggatcagaaatctgtcgcctccacagaa
gagaaacaacaaaatatagtcagtaagaagagaaagaagaagaaacaaacaatacttttt
ggtgacgatgttgatgagtcaaaggaagaagcaagctccaacatccaaacgacaaatgaa
agtttgactgaaatctacaaaccaagtagcatagacttggcacccgttagacaccatagt
aacattgatagcaagaagcctgacccgttagatgaattcatgaatagcttgggaaactcc
tcagctaattccacttcttttgaaggacgtactatagctggtgatctcctagatgcggaa
gatgagtcgttgatgacaggaataagccatgaaaaaccaagcacggatgatggtgttgaa
aattcaagatacaccaaactagctaaacttaaggcaaaaaagaaagttacagaagtacta
tatgataaatccactttggaaccctttcagaagaatttttatgccgaaccagaggatatt
aaacagatgtccgactcagaaattgaagaacttcgactaagtttagataatataaaggtc
aaaggtacaaattgccctctcccaataacaagatggtcacagttaggattaaatactgat
acaatgaacctgatcaccaaaaatctgagatacgagacgctgacgccgattcaatcacag
gcaattccggcaataatgagtggtagagatgttattggtatttccaagacagggtcaggg
aagacaatatcatatctattaccattacttcgacatatcaaggcacagagaccactttcc
aaaaatgaaacaggcccattgggattaattttggcgcctacaagagaactagcattacaa
atccacgatgaaattgaaagatttattgttcatgatgaaaacataagaagtatctgttgt
acaggtggttctgagcttaagaaacagattaatgatctcaaaaggggtgtccaaattgtt
gttgcaacccccggtagatttatcgatcttctaactttaaacacaggtaagctggtaagt
accgaaagaattacctttgtcattatggatgaggcagacaggttatttgatttagggttt
gaacctcagatcacacaaattatgaagaccatccgtccagataaacaatgtgtcttgttc
agcgccactttccccaataaacttcgtaattttgccatgagaatattaaattcaccatta
agtattacaataaactcgaataatttagtaaatgaaaatgttgaacaaaaagttgcgata
tgtgaaaccgactcagccaagtttcaggaattgttgaccattttacaaaatcaaaataaa
caacaagatcaatgtgaaaatgacgaagatgaagagagagaagatgaaactactttagat
aagaaaacaataatttttgttgccagtcaacaaatttgtgatttattatattcacaacta
gttaactttggatattccctttttgctattcatgcagggaaaccatatcaagagagaata
acaaatttagagggatttaaaaataccaagaatagtattttaatctgcactgaggtgcta
tcaagaggtttaaacgtccctgaagtttctctcgtgatcatttataacgctgtgaagaca
tttgcccaatatgttcatacaactgggagaacagctcgtggtaatcttcatggtatagct
ataacattgctgttaccaagtgaattgacagctgggtatatcttatttaaagccatgcga
gcaaatgaaaaggagaaacatgacccattcattattgaaacattacaaggaatggctgaa
gaatttgagaaaggtatgaaggttgggaaatatagactatccaaaggatttggtggtaaa
ggtctggataatttggaaaataaaagagaggagaaacaaacagaggagagacgcaaatat
agccctgctaatactggtacatccgatgcttcaaagggaaagacaaaccttgaagaagga
ggtgaagtaacacaagacactaattctatcgaaatacccaaattggaatatgctatattg
caaaataaaaatcctgatgggtccatcacttttagtgcagatgtaaatgttaatgattta
ccacaattagttagatgggaagccacgaagaatacaacgttgatgttcattaaacatgaa
actggttgtagtatcactaataaaggtaagtattatcctgaaggtaagagtccatcaaca
gataaagatgagccgaagttatacttattgatcgaatcgaaggatgagaaagatatccga
ttaagtattgaattattggaagaaaaagttcgcgaaggtataaggaaggttgaatatcaa
actctaaagagtaataaatattga
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