Nonomuraea coxensis: Nocox_11360
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Entry
Nocox_11360 CDS
T07466
Symbol
pel1
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx00040
Pentose and glucuronate interconversions
ncx01100
Metabolic pathways
ncx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Nocox_11360 (pel1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nocox_11360 (pel1)
Enzymes [BR:
ncx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Nocox_11360 (pel1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QYC39890
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Position
complement(2375650..2377908)
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AA seq
752 aa
AA seq
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MRLLLLLPLLLALTATPAEALSAPGRGTIVVAADGTGDHTTVQAAVDAVPSGNTRPVTIL
VRRGTYRQQVVIPADKPYISLVGDTRDPREVVLTFDVSAATPRPDGSGPYGTSGSASYVI
SAPDFTARNLTFENAYDEAANGPSQAVAVRTTGDRQVYENVRFIGNQDTLYANTASAGTT
ARQYFRDCHVEGDVDFIFGRATAVFDNCVIRSLDRGSAGNNGYVTAASTELANPYGLLIH
RSHLVSDAPAGSVHLGRPWPAGGSATARGQVLVRESWLGQHVKSSPWTDMSGLSWRDARL
SEYRNEGPGAAAGPDRPELTPAQAAAFTPERYLAGADGWNPVRRTPPRPGPRDLGRQVLP
ANDGWAAATTGTTGGSAARPENVHVVTTRAQLKAALGDPADNTPRVIYVKGAIDADTDDS
GRTLTCADYAVDGYSLDAYLAAYDPAVWGRTSVPSGPLEEARKASYAKMAEHVTVTIGSN
VTLVGLGRDAALKSFGLRISGADNVIVRNLTITDTADCFPQWDPTDGADGNWNASFDNVE
VSGSTHVWLDHNTLNDGDNPDSGQPLYFGRPYQVHDGLLDVVRGSTYVTLSWNHLSGHDK
VMLIGNTDNPARYAEEDKLKVTLHHNHFEGLGQRTPRVRFGQVHVYNNYVTGGPGHVYSI
GVGVGSRVYAEANAFDGVPAAKVLTVFGGTAITARDNLVDGRPADLVAAYNAATGAALGA
DAGWTPALTGRKHPARALKALVPASAGAGRRL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttctgttactcctccccctgctgctggccctcaccgccacgcccgccgaagcc
ctgagcgccccgggacggggaacgatcgtggtcgccgccgacggcaccggcgaccacacc
accgtgcaggccgcggtggacgccgtcccctcgggcaacacccgcccggtcacgatcctg
gtccgcaggggcacctaccggcagcaggtcgtcatcccggccgacaagccgtacatctcc
ctcgtcggggacacccgcgatccgcgcgaggtggtgctgaccttcgacgtctccgccgcc
acgcccagaccggacggctcgggcccgtacggcacctcgggcagcgcctcgtacgtgatc
agcgcccccgacttcaccgcccgcaacctcaccttcgagaacgcctacgacgaggccgcg
aacggccccagccaggccgtcgccgtccgcaccaccggcgaccgccaggtctacgagaac
gtgcgtttcatcggcaaccaggacaccctctacgccaacacggcctccgccggcacgacc
gcccgccagtacttccgcgactgccacgtggagggcgacgtcgacttcatcttcggccgc
gccaccgccgtcttcgacaactgcgtgatcaggtcgctcgaccggggcagcgccggcaac
aacggctacgtcaccgccgccagcaccgagctcgccaacccctacggcctcctcattcac
cgcagtcacctggtcagcgacgcccccgcgggcagcgtgcacctcggccgcccctggccg
gcgggcggctcggcgacggcgcgcggccaggtgctggtccgcgagtcgtggctgggccag
cacgtcaagagcagcccctggaccgacatgtccgggctgagctggcgcgacgcccgcctg
tcggagtaccgcaacgagggccccggcgcggcggccggcccggaccggccggagctgacg
cccgcgcaggccgccgccttcaccccggagcggtacctcgcgggcgcggacggctggaac
ccggtgcggcgcacgccgccgcgccccggcccgcgcgacctcggccgccaggtgctgccc
gcgaacgacggctgggccgcggcgaccacgggcaccaccggcggctcggccgcccgcccc
gagaacgtgcacgtggtcaccacccgcgcccagctcaaggccgcgctcggcgacccggcc
gacaacacgccgcgcgtcatctacgtcaagggcgccatcgacgccgacaccgacgactcc
ggccgcacgctgacctgcgccgactacgccgtggacggctacagcctggacgcctacctc
gccgcctacgaccccgcggtgtggggcaggacgagcgtgccgtccggcccgctggaggag
gcccgcaaggcgtcgtacgcgaagatggccgagcacgtcaccgtcacgatcggctccaac
gtcaccctggtcggcctgggccgcgacgccgcgctgaagagcttcggcctgcggatcagc
ggcgccgacaacgtcatcgtccgcaacctcaccatcaccgacaccgccgactgcttcccg
cagtgggacccgacggacggcgcggacggcaactggaacgcctcgttcgacaacgtcgag
gtctccggctccacgcacgtctggctggaccacaacacgctgaacgacggcgacaacccc
gactccggccagccgctgtacttcggccggccgtaccaggtgcacgacgggctgctcgac
gtggtgcgcggctccacctacgtgacgctgtcctggaaccacctcagcggccacgacaag
gtcatgctgatcggcaacaccgacaacccggcgcgctacgccgaggaggacaagctcaag
gtcaccctgcaccacaaccacttcgagggcctcgggcagcgcacgccccgggtgcgcttc
gggcaggtgcacgtctacaacaactacgtcaccggcggcccgggtcacgtctacagcatc
ggcgtgggcgtcggctcccgcgtgtacgccgaggccaacgccttcgacggcgtcccggcg
gcgaaggtgctgaccgtcttcggcggcacggcgatcaccgcgcgggacaacctcgtggac
ggccggccggcggacctggtggcggcctacaacgcggccaccggtgccgcgctcggcgcc
gacgccggctggacgcccgctctgaccggccgcaagcatccggccagggcgctcaaggcg
ctcgtgccggccagcgcgggcgcggggcggcggttgtag
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