Nocardia cyriacigeorgica: NOCYR_2107
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Entry
NOCYR_2107 CDS
T01756
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NOCYR_2107 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_2107 (uvrB)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOCYR_2107 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NOCYR_2107 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
UB2H
AAA_19
DUF87
UPF0730
Helicase_RecD
UvrD-helicase
AIG1
Motif
Other DBs
NCBI-ProteinID:
CCF62889
UniProt:
H6R026
LinkDB
All DBs
Position
2340082..2342256
Genome browser
AA seq
724 aa
AA seq
DB search
MAFATEIPADEQGRTPLAHSEFRPVGEIARTGGRFEVVSPHQPAGDQPAAIDELERRIKA
GERDVVLLGATGTGKSATTAWLIERVQRPTLVMAPNKTLAAQLANELREMLPNNAVEYFV
SYYDYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGT
PQSYLDRSVQLEVGTEVDRDALLRMLVDVQYTRNDMAFTRGSFRVRGDTVEIIPSYEELA
VRIEFFGDEIEALYYLHPLTGDVVRQVDMLRIFPATHYVAGPDRMERAVHDIEAELEQRL
AEFERQGKLLEAQRLRMRTQYDLEMIRQVGFCSGIENYSRHIDGRPAGSAPATLLDYFPE
DFLLVIDESHVTVPQIGGMYEGDMSRKRNLVEYGFRLPSAIDNRPLTWEEFAERIGQTVY
LSATPGNYELGQSGGEVVEQVIRPTGLVDPKVIVKPTKGQIDDLVHEIRQRTDRDERVLV
TTLTKKMAEDLTDYLLGLGVRVRYLHSEIDTLRRVELLRQLRLGEYDVLVGINLLREGLD
LPEVSLVAILDADKEGFLRSSTSLIQTIGRAARNVSGEVHMYADKITDSMQHAIDETERR
RAKQIAYNEEMGIDPQPLRKKIADILDQVYQEADDEVAVGGSGRNASRGRRAQGEPGRAV
SAGVIEGRDVKSMPRAELADLVKELTDQMMNAARELQFELAGRLRDEIADLKKELRGMDA
AGLS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgcaaccgagatcccggccgacgaacagggccgcacgccgctggcgcattcg
gagttccgcccggtgggcgagatcgcgcgtaccggtggccggttcgaggtcgtcagcccg
catcagccggcgggcgatcagccggccgccatcgacgagctggaacgccgcatcaaggcg
ggggagcgcgatgtggtgctgctgggcgccaccggtaccggtaaatcggccaccaccgct
tggctgatcgagcgggtgcagcggcccacgctggtgatggcgccgaacaagacgctggcg
gcgcagctggccaatgaattgcgcgagatgctgccgaacaacgcggtcgagtacttcgtt
tcgtactacgactactaccagcccgaggcctatatcgcgcagaccgatacctatatcgag
aaggacagctcgatcaacgacgatgtcgagcggttgcgccattcggcgacgtcgagcctg
ctctcgcgccgcgatgtggtggtggtcgcctcggtgtcgtgcatctacggcctcggcacc
ccgcagtcctacctcgatcgatcggtgcagctggaggtgggcaccgaggtcgaccgcgac
gcgctgctgcgcatgctggtcgacgtgcagtacacccgcaacgatatggccttcacccgt
ggctcgttccgggtgcgcggcgataccgtcgagatcatcccctcctatgaggagctggcg
gtccgcatcgaattcttcggcgacgagatcgaggcgctgtactacctgcatccgctcacc
ggcgatgtggtgcggcaggtcgatatgctgcgcatcttcccggccacccattatgtggcc
ggccccgaccggatggagcgcgccgtccacgatatcgaggccgaactcgagcagcggctg
gccgaattcgagcgtcagggcaaattgctcgaggcccagcgcctgcgtatgcgcacccag
tacgacctggagatgatccgccaggtcgggttctgctccggtatcgagaactattcgcgc
catatcgacggccggccggccgggtcggcgccggccactctgctcgactatttccccgag
gatttcctgctggtcatcgacgagtcgcatgtcacggtgccgcagatcggcggcatgtac
gaaggcgatatgtcgcgcaagcgcaatctcgtcgaatacggattccggctgccgtcggcc
atcgacaaccgcccgctcacctgggaagagttcgccgaacgcatcggtcagacggtgtat
ctgtccgccacgcccggcaattacgagctgggccagtccggtggtgaggtggtcgagcag
gtcatccgcccgacgggtctggtggatccgaaggtgatcgtcaaaccgaccaagggccag
atcgacgatctggtgcacgagatccgccagcgcaccgaccgcgacgaacgagtcctggtc
accacgctcaccaagaagatggccgaggatctcaccgactatctgctcgggctcggggtg
cgggtgcggtatctgcattcggagatcgacaccttgcgccgggtggagttgctgcgccag
ctgcgcctcggcgaatacgacgtgctggtcggcatcaacctgctgcgtgagggcctggac
ctgcccgaggtctcgctggtggcgatcctcgacgcggacaaggaaggcttcctgcgcagc
agcaccagcctgatccagaccatcggccgcgcggcccgcaatgtgtccggtgaggtgcac
atgtacgcggacaagatcaccgattcgatgcagcacgccatcgacgagaccgaacgccgc
cgggccaagcagatcgcctacaacgaggaaatgggcatcgacccgcagccgctgcgcaag
aagatcgccgacatcctcgatcaggtgtaccaggaggccgacgacgaggtggccgtcggc
gggtcgggccgcaatgccagtcgcggccggcgcgcccagggtgagccggggcgggcggtg
agcgcgggcgtcatcgaggggcgcgacgtcaagtcgatgccgcgcgccgagctggccgat
ctggtgaaggaactgaccgaccagatgatgaacgcggcacgggaactgcaattcgagctg
gccggtcgcctgcgcgatgagatcgcggatctgaagaaggaactgcgtgggatggatgcg
gccgggctgagctga
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