Nocardia cyriacigeorgica: NOCYR_2351
Help
Entry
NOCYR_2351 CDS
T01756
Symbol
recD
Name
(GenBank) exonuclease V (RecBCD complex), alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ncy
Nocardia cyriacigeorgica
Pathway
ncy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NOCYR_2351 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncy03400
]
NOCYR_2351 (recD)
Enzymes [BR:
ncy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NOCYR_2351 (recD)
DNA repair and recombination proteins [BR:
ncy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NOCYR_2351 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
Helicase_RecD
AAA_22
SH3_13
T2SSE
ResIII
RecD_N
PSII_Pbs31
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CCF63128
UniProt:
H6R2T4
LinkDB
All DBs
Position
2605341..2607230
Genome browser
AA seq
629 aa
AA seq
DB search
MTSIQIAQRGTGLLRAFNEAGVLSAADVHVAVRLGRLGREESESALFAAALAVRAVRSGS
VCLELARMREIGIDADETWDTTVDPASLPWPEFDDVLAALRVSPLVVGGTAGPLRPLRLV
EDRREGGPLLYLDRYYQQEQTIRRVLTERSDRHPMVDPAVVRRELDRLFATPGAEPESAT
PDRQRLAAALAATHWTTVVAGGPGTGKTHTIARIIALLDAHQRANPKLPVLRVALAAPTG
KAAARLQEAVRDQATELGLPELSASTLHRLLGWQRGRGTRFRYHEFNRLPYDVIVVDETS
MVSLTMMSRLLAALRPDTRLVLVGDPDQLASVDAGAVLADLVAGPVVGTPNPVLEQIIGP
AGDTTDPEALTALERTRLRGGIVRLTRGRRFGGRIADLAVAVRAGDADTALGLLREGDAA
LSLCEPEDTAAVRADVVTAARQVTDAALAGDAAAALAALESHRLLCAHRQGPFGVERWDR
MAGEWAAAAGAGPESGQPTWYPGQPLLVTANDHEARIYNGDTGVVIRQPDGSLRVALQRG
SEPYLVHPTQFPSVVTVFAMTIHRSQGSQYDAVTIVLPEPESTLLTRELLYTAITRARGH
VRIIGTDAAIRAATARRVLRASGLSHRGN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacctccattcagatcgcccagcgcggcaccggattgttgcgggccttcaacgaggcc
ggggtgctgtcggcggcggatgtgcatgtcgcggtgcggttggggcggctggggcgggag
gagtccgaatcggcgctgttcgcggcggcgctggcggtgcgggcggtgcggtcgggctcg
gtgtgcctggaattggcgcggatgcgtgagatcggtatcgacgccgacgaaacctgggac
accactgtcgatccggcttcgctgccgtggccggaattcgacgatgtgctcgccgcgctg
cgggtcagcccgctggtggtgggtggcacggcggggccgttgcggccgctgcgcttggtc
gaggatcgccgcgagggcggcccgctgctctacctcgaccgctactaccagcaggaacag
accatccgccgggtgctcaccgaacgctcggaccggcacccgatggtcgacccggccgtg
gtgcggcgcgaactggaccggctgttcgccacgcccggcgcggaaccggaatcggccacg
cccgaccggcagcgcctggccgccgccctcgccgccacccactggaccactgtcgtggcc
ggcggacccggcaccggcaaaacccacaccatcgcgcgcatcatcgccctgctcgatgcg
caccaacgcgcgaatccgaaattacccgtcctgcgggtcgcgctcgccgcacccaccggc
aaggccgccgcgcgattgcaggaagcggtgcgtgaccaggccaccgaactcgggctgccg
gaactgagcgcctccaccctgcatcggctgctgggctggcagcgcgggcgcggcactcgc
ttccggtaccacgagttcaatcggctgccctacgacgtcatcgtggtggacgaaacctcg
atggtgtcgctgaccatgatgagcaggctgctcgcggcgctgcgtccggatacccggctg
gtgctggtcggtgacccggatcagctcgcctcggtcgacgccggcgccgtgctcgccgac
ctggtggccgggccggtggtgggcaccccgaacccggtgctggagcagatcatcggcccc
gccggggacacgacggatccggaggcgttgaccgcgctggagcggacccggctgcgcggc
ggcatcgtccggctcacccgggggcgtcgcttcggtggtcgcatcgccgatctggcggtg
gcggtgcgcgccggtgacgccgacaccgcgctggggttgctgcgcgaaggtgatgcggcg
ctgtcgctgtgcgaaccggaggacacggctgccgtgcgcgccgacgttgtcaccgccgcc
cggcaggtcaccgacgccgcgctcgccggtgacgcggcggccgcgctcgccgcgctggaa
tcgcatcgactgctctgcgcgcaccggcagggcccgttcggtgtggaacgctgggaccgc
atggccggcgaatgggcggccgccgccggcgcgggcccggagtccggccagcccacctgg
tatccgggccagccgctgctggtcaccgccaatgatcacgaggcccggatctacaacggc
gacaccggcgtcgtcatccgccaacccgacggatccctgcgcgtggcgctgcaacgcggc
agcgaaccctacctggtgcaccccacccaattcccttccgtcgtgacggttttcgccatg
acgatccaccgcagccagggcagtcagtacgacgcggtgaccatcgtcctccccgaaccc
gaatccaccctgctcacccgcgaattgctctacaccgccatcacccgcgcccgcggccac
gtccgcatcatcggcaccgacgccgccatccgcgccgccaccgcccgtcgggtgctgcgc
gcgagtgggttgagtcatcgcgggaactga
DBGET
integrated database retrieval system
