Nitrospira defluvii: NIDE2054
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Entry
NIDE2054 CDS
T01281
Symbol
prfB
Name
(GenBank) Peptide chain release factor 2 (RF-2)
KO
K02836
peptide chain release factor 2
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nde03012
]
NIDE2054 (prfB)
Translation factors [BR:
nde03012
]
Prokaryotic type
Release factors
NIDE2054 (prfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCRF
RF-1
ABC_tran_CTD
MH1
Motif
Other DBs
NCBI-ProteinID:
CBK41774
UniProt:
D8PEW5
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All DBs
Position
complement(1973131..1974264)
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AA seq
377 aa
AA seq
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MSEPVCVPSANSWLNYGGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDR
ELSRWRDTERRQNDIEALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDS
SNAIFAIHPGAGGTESQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSG
PYAYGYLKAEAGVHRLVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFR
AGGAGGQNVNKVETAIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEA
EFNAIVGEKKDIAWGSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQRK
LTGGKAPEPVAMKDDDI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccgtgtgcgtaccctcggcgaacagttggctcaactacgggggcatcttt
gacctggctcgaatgaccgctgaactcaacgacatcgaagtcaaaacctcccagcctgat
ttctggaaagatacgcaggcggccgccaaggtgaaccgccgcaaagccgccctcgatcgg
gaactgtcgcgctggcgggacaccgaacgccggcagaacgacatcgaggcgctcctcgaa
ctggcgctggaatccggcgatgccgggctggagcaggaactcctggccgaacttgaacca
ttcgaaaaagccgtcgcccaattccgcatcgagttgctgctctcaggcgaattggactcg
agcaacgccatcttcgcgatccatcccggagccggcggaaccgagtcgcaggactgggcg
cagatgctgctgcgcatgtatgtgcgatgggccgaacaaaagggatttaaggtagagacg
ttggatctgctcgcgggggacgaggccgggattaagagcgccacgctgtccgtcagcggg
ccctatgcctacggctatctcaaagccgaagccggcgtgcatcgccttgtgcggatctcc
ccgttcgacgccaacaaacgacggcatacgtccttcgcgtcggtgtttgtctaccccgaa
ctcgaagacgatgtgcaagtggtgatcgacgacaaagacctgcgggtcgatacgtttcga
gccgggggcgccggcgggcagaacgtgaacaaagtcgagaccgccattcgtatcacccac
attccgaccggcatcgtggtgcaatgtcagaacgaacggtcgcaactgcagaatcgcaac
ggcgccatgaaaattttgaaggcgcgcctctttgaagtggagcagcggaagaaggaagcc
gagttcaatgccatcgtcggtgaaaagaaggacattgcctggggcagccagatccggtcc
tatgtcttccagccctaccagatggtcaaagaccatcgaacgggatacgaagtcggccag
gtctccgccgtcatggatggtgagctggacggattcatcgaagcctatctccaaagaaag
ctgaccggcgggaaagccccggagccggtcgccatgaaggatgacgacatttaa
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