Nitrospira defluvii: NIDE2743
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Entry
NIDE2743 CDS
T01281
Symbol
hemD
Name
(GenBank) Porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
nde
Nitrospira defluvii
Pathway
nde00860
Porphyrin metabolism
nde01100
Metabolic pathways
nde01110
Biosynthesis of secondary metabolites
nde01120
Microbial metabolism in diverse environments
nde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NIDE2743 (hemD)
Enzymes [BR:
nde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
NIDE2743 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
NIDE2743 (hemD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Radical_SAM
K-cyclin_vir_C
Motif
Other DBs
NCBI-ProteinID:
CBK42449
UniProt:
D8PGR2
LinkDB
All DBs
Position
complement(2692477..2694042)
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AA seq
521 aa
AA seq
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MTTRAGIVYLVGAGPGDPKLLTIRGKECLEQADVVLYDYLANEALLQHVSPGAERLYVGR
RGRGQYRDQAEINRLLIDHAQAGKRVVRLKGGDPFVFGRGGEEAEAVAAAGLEFEVVPGV
TAAVAAPAYAGIPVTHRTMASTVTFVTGHEDPTKDRSGVEWPRLATVHGTLVFLMGMTNL
PKIVQCLRAEGKEGTTPVALIRWGTRASQRTVVGSLDDIVEKAAAAHMEPPTVIVVGEVV
RLREQLNWFERRPLFGKRILVTRPKPQAAEFSDLIAAQGGEPVECPTIEIVPPEDWAPLD
RALARLSTYNWLIFTSVNGVAPFMTRLLETQRDVRALSGLTICCIGPRTAEALAAYGLRA
DVIPEQFQAEGMLEVLAARQMRGARVLIPRALVARELLPDQLRTRGADVDVVPVYRTIRP
AVETDRLMEQLRTGGIDVISFTSSSTVRNFVELFPTKDELLRSVGKTTVACIGPITAATA
REAGLTVQVMARENTVPALADAIVEFVVNPIDGRTASAVSH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcgcgcaggaatagtgtatttggtcggggccggtcccggagatcccaagttg
ctgacgatacgcggcaaggaatgtctggagcaggccgatgtggtgctgtacgactatctc
gcgaatgaagcgctcttgcagcatgtgtcaccaggggctgaacgtctctatgtcggccgg
cgcgggcgcgggcagtatcgcgatcaggcggagatcaatcggttgctgatcgatcacgct
caagcggggaagcgggtggtccgcttgaaaggtggcgatcccttcgtctttggtcggggc
ggggaagaggcggaagccgttgcggccgccgggctggaatttgaagtcgtccccggtgtg
acggccgccgttgcggcgccggcgtatgcgggtattccggtgacccatcgcacgatggcc
tccacggtgacgttcgtcaccggacacgaagaccccacgaaagatcgaagtggggtcgaa
tggccgcgcctggcgaccgtacatggcacgctggtgtttctcatgggcatgaccaacctg
ccgaaaatcgttcaatgcctgcgagctgaaggtaaagagggtacgaccccggttgcgctg
attcggtgggggacgcgagcttcgcaacgaaccgtggtggggagcttggacgatattgtg
gagaaggcggcggccgctcatatggaaccgcccacggtcatcgtggtcggcgaggtggtg
cgtcttcgggagcaactcaattggttcgagcgccggcccttgttcggaaaacggattctg
gtgacgaggccgaagcctcaagcggcggagttttccgatttgatcgcggctcaaggcggg
gaaccggtagaatgtccgaccatcgagatcgtaccccccgaagactgggctccgctggat
cgggccctggctcgtctgtcgacctacaattggttgatcttcaccagtgtgaacggggtt
gctccattcatgaccagactgttggagacgcaacgtgacgttcgtgcattgtccggcctc
accatttgttgcatcgggccgcgcaccgctgaggctctggccgcctatggcttacgtgcc
gacgtgattccggagcagtttcaagccgagggaatgctggaggtgttggccgcccggcag
atgcgcggggcccgcgtgttgattccgcgtgcgttagtggcccgggagctgcttccggat
cagctacgtacccggggggcggacgtggatgtggtgccggtctatcgcacgatcaggcct
gcagtcgagacggatcgcctcatggaacaactccgtaccggcgggatcgacgtgatttct
ttcacgagttcctcgacggtgaggaacttcgtcgagttgtttccgacgaaggacgagttg
ttgcgctcggtcgggaagacgaccgtagcctgcatcggaccgattaccgcggcgaccgcc
cgcgaggcgggtctcaccgttcaggtgatggcccgagagaacaccgttccagcgttggcc
gacgctatcgtggagtttgttgtgaatcctattgatggccgaaccgcttccgcggtaagc
cattga
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integrated database retrieval system
