Nitrospira defluvii: NIDE2892
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Entry
NIDE2892 CDS
T01281
Name
(GenBank) putative O-antigen export system, permease protein RfbA
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
nde
Nitrospira defluvii
Pathway
nde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIDE2892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nde02000
]
NIDE2892
Transporters [BR:
nde02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
NIDE2892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
CBK42592
UniProt:
D8PH55
LinkDB
All DBs
Position
complement(2827564..2828409)
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AA seq
281 aa
AA seq
DB search
MESTVEQESMAVLVIEPRTGYVQVGWRELWAARELLYFLAWRDLKTRYAQTAIGAGWALM
QPLLSTLIFTLVFSYLAKVPSDGLPYPLFAFAAILPWSLFARSLERSTLSVVTEGGLIKK
VYFPRLIIPIAATFINLVDFTVGLLILMGMMTWYQVLPQWTVLFLPLFVLVALLTALSVS
LWLSALNVKYRDVASVVPLVTQLWMFASPVLYPASLVPESLRWYYGLNPMAGVIEGFRWA
LLGKSAPDWTMVAVSLGVVGFLLIGGVMFFRRVERTFADLI
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacagtagagcaagaaagcatggccgtgctggtaatagaaccccgcacaggt
tatgtccaggtgggatggcgtgaattgtgggctgcacgggaattgttgtactttctcgca
tggcgtgatctcaaaacccgctatgctcagaccgctatcggggctggctgggccctcatg
cagcctttgctcagcacgctgatcttcaccctagtattcagttacttggcaaaagtgcct
tcagatggactgccttatccactctttgcattcgctgccattctgccatggtccctattt
gcgaggagcctggagcgcagcacattgagcgtggtgaccgaaggcggcctgattaagaaa
gtctactttccacggctgatcattccaatcgctgccaccttcattaatctcgttgatttt
accgtcggtctgctgatccttatgggaatgatgacctggtatcaagtgctgccccagtgg
acggtgttgtttctgcctctgttcgttcttgtcgcactgctcacggcgttgtcggtaagt
ctgtggctgtcggccctcaatgtgaaatatcgtgatgtggcttcggtcgtcccattggtg
acgcagttgtggatgttcgcctctccggtgctctacccagcatctctggtacccgagtcg
ctccggtggtactacggtttaaaccctatggcaggggtgattgagggatttcggtgggcg
ctactcggcaagtcggcccccgactggactatggtggcggtgagtttgggtgttgtggga
ttcttgctgatcgggggtgtcatgttttttcggagggtggagcgaaccttcgccgatctg
atttag
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