Nitrospira defluvii: NIDE3121
Help
Entry
NIDE3121 CDS
T01281
Symbol
pccB
Name
(GenBank) Propionyl-CoA carboxylase
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
nde
Nitrospira defluvii
Pathway
nde00280
Valine, leucine and isoleucine degradation
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NIDE3121 (pccB)
Enzymes [BR:
nde01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
NIDE3121 (pccB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
MdcE
Motif
Other DBs
NCBI-ProteinID:
CBK42815
UniProt:
D8PHS8
LinkDB
All DBs
Position
3076390..3078003
Genome browser
AA seq
537 aa
AA seq
DB search
MSGMRVLKTTVNKTSEDFRRAQAQYESLMADLNKHLAIVQAGGPADAAALHKKRGKMTAR
ERIAALLDRGSPWIELSPLAAFGLYDHQVPAAGLITGIGSVSGRFCVIAANDATVKGGTY
FPMTIKKHLRAQEIALENRLPAIYLVDSGGIFLPMQAEVFADKDHFGRIFFNQARMSAAG
IAQIAVVMGMCTAGGAYVPAMCDENVIVQGTGTIYLAGPPLVKAATGEDVTSEELGGADL
HTRLSGVSDHLAQDDHDALDICRSIIATLGRRPPRLRREQIDAPLYPAEELYGIIPANPR
QKWEVREVIARLVDGSRFHEFKARYGATLVCGFARWMGHLVGIVANNGVLLSESALKGAH
FVQLCGQRRIPLVFLQNITGFMVGKDYETRGIIKDGAKMVQAVATAEVPKFTILIGASHG
AGNYAMCGRGYGPRFLFTWPNARTSVMGAQQAAQVLVTVKQQQRAREQGRLSDEEQRRIT
EATRQQYEQEGSPYFSSARLWDDGILDPVETRTVLGLCLDIAASTPARETHVPVFRM
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatgcgcgtcttgaagaccaccgtgaataagacatcggaagactttcgtcgt
gcccaggcacagtacgaaagcctgatggccgatttgaacaagcacctggccatcgtgcaa
gcgggcggaccggccgacgcagcggcgctccacaagaaacgcggaaagatgacggcacgc
gagcgcattgccgccctgctcgatcgagggtctccctggatcgaactcagtcccctcgcc
gcctttggactgtatgaccatcaggtcccggccgcagggctgattaccggcatcggctcc
gtctcgggacgattctgtgtcattgcggccaacgacgcgacggtcaaagggggcacctac
ttccccatgaccatcaagaaacatttgcgggcgcaagagatcgccttggagaaccggctg
ccggcgatttatctcgtcgattccggcggcatcttcctgcccatgcaggctgaggtcttt
gccgacaaagaccatttcgggcggatcttcttcaatcaggcgcgaatgtcagcagccggt
atcgcccagattgccgtggtcatgggcatgtgcacggccggcggcgcctatgtgccggcc
atgtgcgacgaaaacgtgatcgtccagggaaccggcacgatctacctggcaggaccgccg
ctggtcaaagccgcaaccggcgaagacgtcaccagtgaagaactcgggggagccgacctg
cacacccgtctatcgggcgtgagcgatcatctggcccaggatgaccatgacgcattggac
atctgtcgatcgatcatcgccacgctcgggcgacggcctccgagacttcgtcgagaacag
atcgacgcccccctgtacccggccgaagaactctacggaatcattcctgcgaacccgcgt
cagaaatgggaagtccgggaggtcattgcgcggctcgtggacggcagccgctttcatgaa
tttaaagcacggtacggtgccacgctggtctgtggcttcgcccgctggatgggtcacctc
gtgggaatcgtcgccaacaacggggtgctgctctcggagtccgcgttgaaaggcgcgcac
tttgtccaactctgcgggcaacggcgcattccgctggtgtttctgcaaaacatcaccggg
tttatggtcggaaaagattatgagacgagaggcatcatcaaagacggtgccaagatggtg
caggccgtcgcgaccgccgaggttcccaagttcaccatcctgatcggcgcctcacacggc
gccggcaactatgccatgtgcgggcgtggctacgggcctcgcttcctcttcacctggccc
aacgcgcgaacctcggtcatgggcgcgcaacaggccgcgcaagtccttgtcaccgtcaag
caacagcagcgtgcacgtgaacagggacggctgtcggatgaagaacagcggcgaatcacg
gaggccacgcggcagcaatatgagcaggaaggcagtccctatttcagcagcgcgcgactc
tgggacgacggcattctggatcccgtggagacgcgaacagtcctgggtctctgcctggac
atagctgcgtccactccggccagagaaacccatgtgccggtgtttcgtatgtga
DBGET
integrated database retrieval system