Nitrospira defluvii: NIDE4091
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Entry
NIDE4091 CDS
T01281
Name
(GenBank) putative Type IV pilus assembly protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
nde
Nitrospira defluvii
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nde02044
]
NIDE4091
02035 Bacterial motility proteins [BR:
nde02035
]
NIDE4091
Secretion system [BR:
nde02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
NIDE4091
Bacterial motility proteins [BR:
nde02035
]
Pilus system
Pilus assembly proteins
NIDE4091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neisseria_PilC
Motif
Other DBs
NCBI-ProteinID:
CBK43760
UniProt:
D8P8C8
LinkDB
All DBs
Position
complement(4042128..4046552)
Genome browser
AA seq
1474 aa
AA seq
DB search
MNRRTLVAVMLVAGSLSAALLGSRDAEAVVSNADYTAVPAFVSNATTPNIIVVMDNSGSM
SNRACESSSCGTLADGSTSTDPAWTNTTRYSGYFDSLRCYTYNTTDTRFESGTGKTALAT
ACSDTEWDGNFLNWATLRRFDAVKRAMIGGDCASTRATDGTCPASGTPALKTVRAQAAGL
SNERADVSQAGAAGRIPLTDRNKVAPQDPIYVHISDAYFCLENDTSLNSDCGDSSSVRKY
HLKVGYTTEPTGVIQQIGSKARFGLVEFKSSSEGARMLVGAGSRQSIDWADGDVETFTTN
TAAMVDAVQESYPSTWTPLAEALYETARYVAQIQSTFSTGYVYPIAFSGGVSNGVNFATS
GAGSIGTSEIKALVGSETCPAGYITNACGRDPYFFGQNHTPPWSASSQVVACCRTFVIVF
TDGEPTQDQNIPTALQDYGHAHHGIHCTVLNVSTGEGDIAAPPRPIDSLCNTNAATPFND
LLAEHKTNYASSGSHYLDDVAYWAHTTDLRPCSGTTDGTIAGLSVTGHCIAGTQSLTVYS
FFAFGNINGRGILAQAARLGGFEDSNNDGIPQTNEWDKENNLTGAATPDGIPDAYFESSN
VNDLQDKLLATIASILRRSASGSSVSVLATASTGEGALYQSYFYPSTIEPSTLSDVKWTG
YTQALFIDTFGNTREDTNQDGRLDYKVDKIIKTRFDSVSNSVKVDKYVDSDGDGLPNDQN
SDNLVTVADCNPCGQTLSEILPIWEAGKQLALKDSTTRTILTWVDSDHDGVVDSGEQLAF
TTANEPTLRPYLRATSSAEGTKIINFVRGCDVGTCAEQATTRDRRLQVPAGSGSLKVWKL
GDVIHSTPTVVAGPKDRHDAIYGDQSYSAFLQKWYNRRQVAYVGGNDGMLHAFNAGYYHP
GDDASASAPANIIEHGWFTTAPADNSTGAPLGDELWGFVPYELLPQLEFLSRADYQHTYY
VDLPLKVADVRIFTPDTDHPNGWGTILIGGFRMGGSCGACSAGTGAPPMTVNISGTDYTF
YSSYFAMDITNPDAPKLLWSFSSSNLGLTTSAPAVVRVNPAADAKASNTNAKWYMVVGSG
PTGYDASVVQSAKVFAVDLATGPGSGNSLVTSYSVGSWNSYIGDITAFDRDLDYRHDVVY
FGRVIHDGALPWRGKIYRLTMGAGGATAKFGTVTSPTQWGIASGSARVPTEMLDTFVSGA
EMGPVATAPSVTTDDAANVWVFAGSGRYYSKSDKTDVSTQYFVGLKDSVLNAGCNQSAGA
LNCMDNDLVDVSNATVCVVGVGDCGQASGTNQVSGVSGATTFTGLIGLVQSKDGWVTKLV
EPANPPTNPVPYGIGERAVSSPTVFGGVVFFPTFIPTNDICVSSGTSRLWALFYKTGSAY
QEPIIGTTTSGANQTVNKFGSLGEGLAFGIVVHMGSGRDGGSPFGLLINMSQGNFGDCAT
CGFGGGSPGGLPSSNIGANVAIDPRSRYFSWTNM
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccgaacccttgtcgctgtgatgttggtggccggcagcctgagtgctgcgttg
cttggctcccgtgatgccgaggccgtcgtgtccaacgccgattacacggctgtgccggct
ttcgtgtcgaacgcgacgacaccgaatatcattgtggttatggacaactcgggcagtatg
agcaaccgggcctgtgaatcgtcgtcatgcgggacgctggcggacgggagtacgtccacg
gaccccgcatggaccaatactacacggtactccgggtactttgattcgctgcgttgctat
acctacaacacgaccgatactcgattcgagagcggaaccggcaaaacggcgttggcgacg
gcctgttcggacacggaatgggacgggaactttttgaactgggccacgttgcgccggttc
gatgcggtgaagcgcgcgatgatcggcggggactgtgccagcaccagggctacggatgga
acgtgcccagccagtggcacgccggcactcaaaacggttcgcgcgcaggctgccggtctc
agcaatgagcgcgccgatgtcagccaagctggagctgcgggccgtattccgttgacagat
cgaaataaggtcgcgccgcaggatcccatatacgttcatatatccgatgcgtatttttgc
ctcgagaacgatacaagcctcaatagcgattgcggagattcctcgagcgttcgaaagtat
cacctgaaggttggatacacgacagagccaaccggggtcatccagcagatcggcagcaag
gcgcggttcgggttggttgagttcaagtccagcagcgaaggcgcgcgtatgctggtaggg
gccgggtcgcgccagtcgatcgactgggctgacggcgacgtggagacgttcacgacaaac
accgcggccatggttgatgccgtgcaggaatcttacccgtcgacatggactccgctcgct
gaggcgctctatgagaccgcgcgctatgttgcgcagatccagtcgaccttctcaacaggt
tatgtgtatccgatcgcgttttcgggtggtgtgtcaaacggtgtcaattttgctacgagc
ggtgccgggtcgattggcacaagtgaaatcaaggcattggtcggttctgaaacgtgcccg
gccggctatatcacgaatgcctgtggccgcgacccgtatttctttgggcaaaaccacacg
ccaccatggtctgccagttcgcaggtggtggcctgctgccggacgtttgtgatcgtcttc
acggacggtgaaccgacgcaagaccagaatatcccgacggcgcttcaagactatggtcat
gcccatcatggtattcactgtacagtgctgaacgtttctactggggaaggtgatatcgcg
gcgcccccacgccccattgacagtttatgcaatacgaatgcagccacaccctttaacgat
ttgctcgcagagcacaagaccaactatgccagcagcgggagccactacttggatgacgtc
gcctattgggcccacacgaccgacctccggccttgtagcggcacgactgacggcaccatc
gcaggtttatcggtcaccgggcattgcatcgcagggactcagagtctgaccgtgtactct
ttcttcgcattcggcaacatcaatggtcgtggaattctggcccaagcggcccggttgggc
gggtttgaggattccaacaatgacggcatcccacaaacgaatgaatgggataaagagaat
aatctcaccggcgcggcgactcctgacggtattccggacgcctattttgaatcttcgaac
gtgaacgatcttcaggacaagctgctcgccacgatcgcaagcattctcaggcgaagtgcg
tccggttcatctgtatccgtgctggctactgcctcgaccggcgaaggggccctgtaccaa
tcctatttttatcccagcacgatcgaaccctcgacgctgagtgacgtgaaatggaccggc
tatacgcaggccttgtttatcgataccttcggcaatacccgtgaggatacgaaccaggat
ggccggcttgattacaaggtcgacaagatcatcaagactcgttttgattccgtgtcgaat
tcggtcaaagtcgacaaatatgtggattccgatggagacggattgcctaacgatcagaat
agcgacaatctggtgacggtggcggactgcaacccctgcgggcagacgttgagcgagatc
ctgcccatttgggaagccgggaagcaactggcgttgaaagactccaccactcgtaccatt
cttacctgggttgattccgatcatgacggcgtggtcgattccggcgaacagctggcattc
acgacggccaacgagcccacgctccgaccataccttcgtgccacgtcgagtgcggaaggg
accaagatcattaattttgtacgtggttgcgatgtggggacatgcgcggaacaggcgacg
acaagggatcgtcgtcttcaggttccggccgggagcgggagcctgaaggtgtggaaactc
ggggatgtcattcactccaccccgacggtggttgcgggtccgaaggaccggcatgatgcc
atctatggcgatcagagttattcggcttttcttcagaagtggtacaaccgcaggcaggtc
gcctacgtgggcggaaacgacgggatgttgcacgcgttcaacgcgggttattaccatcca
ggcgatgatgcgagtgcctctgctcccgcaaatattatcgaacacggctggtttacgact
gcccccgcggacaattccaccggggctccattaggggatgagctgtggggatttgtgccc
tatgaactccttccgcagctggagtttttgagccgcgccgactaccagcatacctattat
gttgatttgcccctcaaggtcgcggatgtccgcattttcactccggacacggatcatccg
aacgggtggggcacgatcctgatcggcggattcagaatgggtggaagttgcggtgcctgt
tcggcgggaaccggtgcgccaccgatgacggtcaatatcagcggtacggactataccttt
tacagttcgtacttcgccatggatatcacgaatcctgatgctcccaaattgctctggtcg
ttcagcagttcgaatttggggctgacgacgagtgcgcctgccgtggttcgcgtgaatccc
gcggccgatgccaaggccagcaatacgaatgcgaagtggtacatggtggtcgggtctggc
ccgaccggatatgacgccagcgtagtgcagagtgcaaaagtctttgccgtcgaccttgcg
acgggcccgggtagcggcaacagcctcgtcacgtcgtattcggtggggtcctggaattcg
tatatcggagacatcacggccttcgatcgagatctcgattaccgccacgacgtcgtgtat
ttcgggcgagtgattcatgacggagcgcttccctggcggggcaagatttatcgtttgacc
atgggagccgggggagccacggccaagttcggcacggtcaccagtccgactcagtggggc
atcgcctcggggagcgctcgcgtgcccacggagatgttggatacgttcgtatcaggggcg
gagatgggccccgttgcgaccgcgccttccgtgaccaccgacgatgcggcaaacgtctgg
gtctttgcgggcagcggacgctattacagcaaatccgacaagactgacgtgtcgacgcag
tacttcgtggggttgaaagactcggtcctcaatgccggatgcaatcaatcagccggcgca
ctcaactgcatggacaatgatcttgtggatgtctcgaatgccacggtctgtgtggtggga
gtcggcgattgtggtcaggccagtggaaccaaccaagtttccggcgtgtccggtgccacg
acgtttaccggcttgatcggattggttcagagtaaagatggttgggtgactaaattggtc
gaacccgccaacccaccgactaacccagtcccttacggcatcggtgaacgcgcggtgagt
agtccaacggtattcggtggggtggtgtttttccccaccttcattccaacgaacgacatt
tgcgtctcatccggaacgagccgactctgggcgctcttctataaaacggggagtgcctat
caagagccgatcatcggaacgacgacctcaggagcgaatcaaacggtcaataagttcggc
tctctcggcgaaggattggcattcggtatcgtggtccatatgggctcaggacgggacggc
ggcagtccgttcggcctcctgatcaatatgagtcagggaaacttcggtgactgtgcaacc
tgcgggttcggcggagggtctcccggaggccttccgagctcaaatatcggggccaatgtt
gcgattgatccacggagccggtacttctcatggacgaacatgtga
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