Nitrospira defluvii: NIDE4203
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Entry
NIDE4203 CDS
T01281
Name
(GenBank) protein of unknown function
Organism
nde
Nitrospira defluvii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_17
Alkyl_sulf_dimr
TPR_9
TPR_14
TPR_12
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
CBK43870
UniProt:
D8P8N8
LinkDB
All DBs
Position
complement(4145356..4150230)
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AA seq
1624 aa
AA seq
DB search
MRSDKKSPLKSDKKVPPKVQKKGSIGFNKKSALLEDAITQMNAGKYGRASSALKDLLALD
PLNAEARRLFATLHLRLGSLMSARTAFESLAREAMERQDYWLAESLLREYLTAGPRYVPF
LEMLGRVYEEKGDVMAAVAEYGKAVEVLLEDPDTDHPNRASDLFVRIRSLAPGSPVAFRF
AAMFDTVTGQVLQASPQPSAVDTLSATAPAPALDETPPGTDSAVVMPWEQVETASGDVPC
QQEVQISAVEQSPEVIAAATPSSTLEAVTEGLPQARPEESLSVTLPVDAPQESDVPPQSE
SSVSAVTPAVEPVPVAGESDRPVVDVDLASTEPTEIVPAPVAEMSPPMVDASAKTGPDPI
ATPLAQSVPMPWDQVEEAAGTIPPQPEGPAAPAGITPTHSGETAPTPSVAESAGPTIEVL
TQSSAHPIATAPASPAPMPWDQIEEVAVVIPSPPPSSPEPVMVEPESLPPTQNEVSTLSL
AGVAPIQPVEPEPPAAAAPMPSDEMALQASVSGPLTPTIEVLTQASSHPIAQAPTSPAPM
PWDQIEEATSAVDPHTQPLAELGTDEVEQTIESPAPNQAVEVNQDAESLPSPRPSELTSS
GLSWEEILAAVAAMQASPTPAQTLSDGEQKPAPDAAVQEQTAGSLTAPPAPAEEETPLFE
ATVPDIPADQAGAATSLSAPMPWEQIEVDDVTIPRQEPEPEFGPAFTGGAVAVQDTTVVL
PVVSDATEAPVVGEAYSVEAVADRPVEPAATETSELRILSPDAPIAVPEESIRIPVENSK
AVEGPIPDAVPEAEQPAESTTDRAVEPPLRLADRESVVATVLEEPRSAPVEPVTEFAIAV
STDVPPTEPELVVVEELQAPVDEAVAELPLEPVLPVEQHAESLGLQNVMVEPAPEAVAED
LAPVATPSLADEQPVAPDAPLSPVDPEVTPQSEPEMVVTDQEPSSQLAVEVRDVDRVSIS
EFTEPPVETSLTPAPETVSLPPAPSPIVAATEEPVFPLVEPTQATAVTPAEELLETPAES
VASSEEQAPTSTAQADSQTDAGEGLRILWDDSSSKPTPSASTGNMLTRWLKKPAAPVPDE
VAEADPPATVSDEAPAPVPAVSVEQQEPAVVVVERLPDEQEAVAPMPVDAPVARPKPSQP
AGAGAWTRMGELVASLVGAGVSTTQSLVVMALALVGLTLALIGGVVGAVALTWLVLEEQP
GAAYRAMTSVPQRTLQDSSKNGYVLLLGFGAAASQDPVQAGIDRRVEGADRAYAHTCLTG
EGASSGGDQGASAESMGKWMKTADPAAQMRAEATDVKGWASRAEVSMGRYRQWLTKPFED
WGYGQPITPNCGLILYAHQLYIAEGFAQDVEAGVARLETDLTAWRTVLGQAKTLPVKMLA
SAAMKDDVMVMSGLLLRPELDDRFVSRLAKLARPLEQTEQSVRWPMQSQFVLATKTLDEA
VTEDRSDARPFYGSIAAALPLPKQRRFNAYAQYYEAAGKAAAEGRYTDLPKQSQFVHPPP
YGIGDMVMNPIESLVGVDPLPTWETYAGRVLETDARLRLASLQAWLRRTPPEQDLLTRIA
KAGQGVYDPFTGFPILVNMKKGVLYSVGQDLKDNEAQDRYDLVAPIPSVAWAGGKRPADA
DKSK
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatctgataagaaatctcctctcaagtcagacaaaaaagtccccccgaaggtccag
aaaaaggggagcatcggcttcaacaaaaagtcggcgcttctcgaggatgccattacacaa
atgaacgccggcaagtatggccgggcgtcctctgcgttgaaagacctgctcgcgcttgac
ccgctcaacgcggaagcccggcgcctcttcgccacgctccacctgcggctgggcagcctc
atgagcgccaggacggcgtttgaatcgctggctcgggaggcgatggagcggcaggactat
tggttggcggagtcgctcctgcgggaatatctaacggcgggaccccgctatgttccgttc
ctggagatgctgggccgtgtctatgaggaaaagggcgacgtcatggcggcggtggccgag
tacggcaaggcggtggaggtgttgctggaagatccggacaccgaccatccgaaccgggcg
agcgatctctttgtgcggattcgttccctagccccgggaagtccggtggcctttcgtttc
gcggccatgttcgacacggttacggggcaggtcctgcaagcgtctccccagccttccgcg
gtcgatactctcagtgcgaccgctccagctccggcactcgacgagactccccctggcaca
gactccgccgtggttatgccttgggagcaggtggagacggcctccggtgatgtcccatgc
caacaggaagtccagatctcggcggtcgagcagtcccctgaggtgatcgctgccgccact
ccctcttccaccctggaggcggtgacggaaggtctaccgcaggctaggccggaggagtca
ctgtcggtcacgctgccggtcgatgcgccgcaggagtcggacgttccacctcaatctgag
tcctccgtttcagccgtcaccccggcggtggagccggtgccggttgccggtgaaagtgat
cgtcctgtcgtagatgtcgatcttgcttcgacagagccgaccgaaatagtgcctgcaccg
gttgctgaaatgtcccccccaatggttgacgcgtcggcgaaaaccggtcctgacccgatt
gctacaccgttggcacagtccgttccgatgccttgggaccaagtggaagaggccgctggg
accattcctccgcagcctgaaggaccggcggcgccggcgggtattactcctacccattcg
ggagagacggctcccacaccatcagtggccgagtcggcaggccccacgatcgaggtcctc
acgcagtccagtgcgcacccgattgccacagcaccggcgagccccgcgcccatgccttgg
gaccagatcgaagaggttgcggtcgtaatcccctcgccgccgccgtcgagtccggaaccg
gtcatggttgaacccgagtcattgccgccaacgcagaatgaggtctcaacgctgtcgttg
gccggggtggctccaatccaacctgtcgaacctgaaccgccggctgccgccgctccgatg
ccgtccgacgagatggccctccaggcatcagtgtctgggcccctcacgccgacgatcgaa
gtgctcacccaggccagtagccaccctattgcccaagccccgacgagtcctgcgccgatg
ccctgggatcagatcgaagaagcaacgagtgctgtggatccgcatactcagcccctggcg
gagcttggaacggacgaggtcgagcaaacgatcgagtctcctgcgccaaaccaggcggtc
gaggtcaatcaggacgcggagtcgcttccttcaccgcgtccttcggaactcacctcatcg
ggactctcatgggaggaaattcttgcggctgtggcggccatgcaagcgtctcctacgccc
gctcagacgctttcggatggtgagcagaagcctgcgcccgatgctgcggtacaggagcag
acggccggctcgctgacggctccaccagctcccgcagaggaagagacccccttgttcgag
gcgacggtaccggacatcccggctgatcaggccggtgcagccacatctttgtcggcgccc
atgccatgggaacagattgaagtggatgacgtcacgattccgcgccaggagcctgagccg
gaatttggcccggcctttaccgggggtgccgtggcagtgcaggacaccacggtagttttg
cctgtcgtgtccgatgcgactgaggcaccggttgtcggagaggcgtattcggttgaagcc
gttgctgatcgccctgtggagcctgccgccacagagacttcggagttgcggattctctcc
ccggatgcgccgattgcggtgcctgaggaatctattcgtattccagtcgagaattccaag
gcggtcgaggggccgattccggacgccgtgcctgaagctgagcaaccggccgaatccacg
accgatcgagcggtggagcctccgttgcgcctggccgaccgtgagtcggttgtcgccacg
gttttagaggaaccgcgttctgctccagtcgaaccggtgacggagtttgccatcgccgtg
agcaccgacgtgccgccgacggaaccggagctggtcgtcgtcgaagagcttcaggccccg
gtcgacgaggcggttgcggaattgcccttggaaccagtcctaccggtggagcagcacgcg
gagagtcttggcttacagaatgtcatggtcgagcctgcgccggaggcggtcgccgaggac
ctagctcctgtcgccacgccttccctggccgacgagcagccggttgcaccggatgctccc
ttgtcgccggttgatccggaggtgacacctcaatcagaaccggagatggtggtgaccgat
caggagccatcctctcaattggcggtggaggttcgtgacgttgacagggtttccataagc
gaattcactgagcccccggtggagacatcactcactccggctcctgagacagtctcactt
ccaccggctccctcgccgatcgttgccgcaacggaggagccggtattccctctggtcgaa
cccacgcaagcgacggccgttactccagcggaagaactcctggagacacctgctgagtct
gtggcttcttcggaggagcaggcgccgacttcaacggctcaggccgattctcagaccgat
gcaggtgaggggctgcggattctgtgggatgactcgtcgtctaagccgactccgagcgcc
tcaaccgggaacatgctgacacgctggctcaagaagccggcagctcccgttccggatgaa
gttgctgaggccgatccccctgcgaccgtttcggatgaagcgccggctcctgttcctgct
gtgtctgtcgagcaacaggagcccgccgttgttgttgtggaacgcctgcccgacgaacag
gaagctgtggcgcctatgcccgtggacgcgcctgttgctcggcccaagccgagtcagcct
gccggagccggcgcgtggactcgaatgggcgagctggtagcctctctggtgggagccgga
gtctcgacgacccagtccttagtcgtcatggctctcgcgttggtcggactcacgctggcc
ctgatcggcggagtggtcggggcggtcgcgctgacgtggctcgtcctggaggagcagccc
ggcgcggcctatcgtgcgatgacgtcggtgccgcaacgtacattgcaggattccagcaag
aacggatatgtccttctccttggattcggcgccgcggcgtcccaggatccagtacaggcc
gggatagaccggcgcgttgagggggccgatcgtgcctatgcccacacttgcctgaccggt
gagggagcatcgtccggcggggatcagggagcttcggcggagtcgatgggcaagtggatg
aagactgccgatccggcggcgcagatgcgtgcggaggcgacggatgtgaaggggtgggca
tcccgggccgaggtcagtatgggccgataccggcagtggctgacaaagccctttgaagat
tggggatatggacaaccaattaccccgaactgcggtctgattctctatgctcatcaactc
tatattgccgaggggtttgcacaggatgttgaggccggggttgcacgacttgagaccgat
ttgacggcctggcgtacggtcttggggcaggctaagacattgccggtgaaaatgctggcc
agtgccgcgatgaaggatgatgtcatggtcatgagcggactcttgctccggcctgagctt
gacgaccgattcgtcagccgattggctaaactcgcccggccgcttgagcagacagagcag
tcggttcgttggccgatgcagagtcagttcgtgctggccaccaagacgctggacgaagcg
gtaaccgaggaccgatccgatgcccggccgttctatggctccatcgcggcagcgttaccg
ttgccgaagcagcgccggttcaatgcctatgcgcaatattatgaggctgcgggcaaggct
gctgcagaggggcggtataccgatttgccgaaacagtctcagttcgtacacccgcctccg
tatgggatcggggacatggtgatgaatcccattgaaagcctcgtcggggtggatcccctt
ccgacatgggagacctacgcaggtcgagtgctggaaacggatgcgcgcttacggttggca
tccctgcaggcctggttgcgacggacgccaccggagcaagacctgctcaccagaattgcc
aaggcggggcaaggcgtctacgaccccttcaccggtttccccatcctggtgaatatgaag
aagggcgtcctctatagtgtcggccaggatttgaaggacaatgaagcacaggaccggtac
gacctggtggcgccgattccctcggtcgcatgggccggtggaaagcggcctgcagacgcc
gataaatccaagtaa
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