Naumovozyma dairenensis: NDAI_0A01940
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Entry
NDAI_0A01940 CDS
T02234
Symbol
NDAI0A01940
Name
(RefSeq) hypothetical protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03030
DNA replication
ndi03410
Base excision repair
ndi03420
Nucleotide excision repair
ndi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDAI_0A01940 (NDAI0A01940)
03410 Base excision repair
NDAI_0A01940 (NDAI0A01940)
03420 Nucleotide excision repair
NDAI_0A01940 (NDAI0A01940)
03430 Mismatch repair
NDAI_0A01940 (NDAI0A01940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndi03032
]
NDAI_0A01940 (NDAI0A01940)
03400 DNA repair and recombination proteins [BR:
ndi03400
]
NDAI_0A01940 (NDAI0A01940)
Enzymes [BR:
ndi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NDAI_0A01940 (NDAI0A01940)
6.5.1.6 DNA ligase (ATP or NAD+)
NDAI_0A01940 (NDAI0A01940)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
NDAI_0A01940 (NDAI0A01940)
DNA replication proteins [BR:
ndi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NDAI_0A01940 (NDAI0A01940)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NDAI_0A01940 (NDAI0A01940)
DNA repair and recombination proteins [BR:
ndi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NDAI_0A01940 (NDAI0A01940)
NER (nucleotide excision repair)
Other NER factors
NDAI_0A01940 (NDAI0A01940)
MMR (mismatch excision repair)
Other MMR factors
NDAI_0A01940 (NDAI0A01940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
HTH_36
Motif
Other DBs
NCBI-GeneID:
11494225
NCBI-ProteinID:
XP_003667595
UniProt:
G0W3G4
LinkDB
All DBs
Position
1:complement(432302..434599)
Genome browser
AA seq
765 aa
AA seq
DB search
MLRQLGTTRILLPNLRPIRYITMPPATPSSSSSSSSSSARENNVSKGRKQQATLGRFFSS
INHKKPTKDTALKNESKEETKEENKDDSDSIPRKKIRLSTSSSSPSIMAESKPKSPIKLN
TERSSSPASASASTTPTPIVADHTLDPKTAVSKPFLCAIPYKEVCQLFQEIETTSSRLSI
IKLCSDFLIKIMKQDPQNLIPVTYLFINKLGPDYEPGLELGLGEGLLMKTISESCGKSLT
QIRAQYRELGDLGQIALEARNVQPTMFKPKPLTVGEVFNNLKMIAKAAGKDSQTKKIKLI
KRMLTACEDGVEAKFLIRSLESKLRIGLAEKTVLISLSKALLVKEFDANKDFDMELLETA
EGKIRDAFCQVPNYEIVINSCLQYGIMNLNEHCSLRPGIPLKPMLAKPTKAINEILDRFQ
GETFTSEYKYDGERAQVHLLEDGTMRIYSRNGENMTERYPEIHIGDFVKDRNETKTLILD
CEAVAWDKEQQKILPFQVLSTRKRKDVLAKDVKVRVCLFAFDILCHNSNKLINYSLKERR
EILHRVTTPAPGEFQYATELTTSNLDELQKFLDQSVNDSCEGLMVKMLEGEESHYEPSKR
SRNWLKLKKDYLEGIGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNDNTGEFETCCKIGT
GFSDEMLQQLHEKLKATVIDGPKATYIYDSSAEPDVWFEPSLLFEVLTADLSLSPIYKAG
SSAYDKGVSLRFPRFIRIREDKGVEDATSSEQIIELYENQSHRSS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttaagacaattgggtactactaggatccttttaccaaatttacgaccaatacgttat
ataactatgcctccagcaacaccatcatcatcatcatcatcatcatcatcatcagcaaga
gaaaataatgtcagtaaaggtaggaaacaacaggctactttgggaagattcttctcttca
ataaatcacaagaaacctacaaaggatactgcactcaaaaatgaaagtaaagaagaaaca
aaggaagaaaacaaggatgattccgactcaattccacgaaaaaaaatacgtttatcaaca
tcttcttcttctccaagtataatggcagaaagtaaacccaaatcaccaataaaattaaat
actgaacgctcatcctcccctgcatcagcatcagcatcgactacaccaacaccaatcgta
gcagatcacacattagaccctaagactgccgtaagtaagccatttttatgtgccatccca
tataaagaagtttgccaattattccaagaaatagaaactacatcctcccgtctctccata
atcaaactatgttcagactttttaatcaagataatgaaacaagacccacaaaacttgatc
cccgtaacgtatctattcattaacaaattaggaccagactatgaacctggtcttgaattg
ggtctcggggaaggattactcatgaagacgattagtgaatcatgtgggaaatcattgaca
caaattagagcacaatatagagaattaggtgatttgggtcagattgcgttggaagctagg
aatgtacaacctactatgtttaaaccaaaaccattgactgtaggggaagttttcaataat
ttgaaaatgattgcaaaggctgcggggaaagatagtcagactaagaagattaaattgatt
aagaggatgttgacagcttgtgaagatggtgtggaggccaaatttttgattagatctttg
gaatctaaattgagaattgggttagccgagaagactgtcttgatttcattatctaaagca
ctgttagttaaagaatttgatgctaataaggattttgatatggaattattggaaactgct
gaggggaaaattagagacgcattttgtcaagtacccaattatgaaattgttattaattct
tgccttcaatacgggattatgaacttgaatgaacattgttccttaagacctgggatccca
ttaaaacctatgttggctaaaccaacaaaggcaattaatgaaatcttggatagatttcaa
ggtgaaacttttacttcagaatataaatatgatggtgagagagctcaagtacatttattg
gaagatgggactatgaggatctattctagaaatggtgaaaatatgactgaaaggtatcct
gagattcatattggtgatttcgttaaagataggaatgaaacaaagactttgatcttggat
tgtgaagctgttgcatgggataaagaacaacaaaagatattaccctttcaagtattgagt
acaagaaaacgtaaagatgtgttagcgaaagatgtgaaagtaagagtttgtttatttgca
tttgatattctttgtcataactctaataaattgataaactatagtttaaaggaaagaaga
gagatactacatagggtgactactcccgcacccggagaatttcaatacgctaccgaatta
accacatctaatttagatgaattacaaaaattcttagatcaatccgtaaatgattcttgt
gaaggcttaatggttaagatgcttgaaggtgaagaatcacattacgaaccaagtaaaaga
tctcgtaattggttaaaattgaagaaagattatctagaaggtataggagattcattagat
ttatgtgtcctaggtgcatattatggtagaggcaaaagaacaggtacatatggtgggttt
ttacttggttgttataatgataatacaggtgaatttgaaacatgctgcaaaattggtaca
gggttttcagatgagatgttacaacaattacacgagaaattgaaagcaacggttatcgat
ggtccaaaggccacctatatttatgattctagtgctgaaccagacgtatggtttgaacca
tctttattattcgaagtgctaacggcagacctttcactatcacctatctataaagcaggg
agctcagcatatgataaaggtgtgtcattgagattcccaagattcattcgtattagagaa
gacaaaggtgtagaagatgcaacatcatcagaacaaattatcgaactgtatgagaatcaa
agtcatagatcaagttag
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integrated database retrieval system
