Naumovozyma dairenensis: NDAI_0I02260
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Entry
NDAI_0I02260 CDS
T02234
Symbol
NDAI0I02260
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ndi
Naumovozyma dairenensis
Pathway
ndi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ndi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NDAI_0I02260 (NDAI0I02260)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndi03400
]
NDAI_0I02260 (NDAI0I02260)
Enzymes [BR:
ndi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NDAI_0I02260 (NDAI0I02260)
DNA repair and recombination proteins [BR:
ndi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NDAI_0I02260 (NDAI0I02260)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
11493806
NCBI-ProteinID:
XP_003672038
UniProt:
G0WG84
LinkDB
All DBs
Position
9:complement(514711..517614)
Genome browser
AA seq
967 aa
AA seq
DB search
MDGKAVTPTLDNDTRPATPHNFAPSPSFRWLCDELFVKLERIQQASTSKASKEFQKPINV
QYYEVIQHFINLWRKTVGNDIYPALILILPYRDRRIYNVRDYTLIKAICSYLKLPKNSFT
EKRLLSWKQRAGRSVRLSSFIVSEIKKRKSEPQVGTREEITIDKLNQCLDSLSEERNSKG
SMGYRGLSDSPTFVFCLENMTFVELQFFFDIILKSRVIGGHEHKFLNVWHPDAQDYLSVV
SDLKTVANKLWDPAVHLKNDDLTINVGSPFAPQSAKKLSISYEKICAKLKHDFFIEEKMD
GERIQLHYQDYGNKLSFLSRRGTDYTYLYGESIKDGTVSKYLHLDNNVQNCVLDGEMVTF
DKERNALLPFGLVKSSARSIITQEGVANEGYRPLLMVFDLVYLNGVSLVNIPLYQRKLYL
EKIFTPERHIVELLRSKRCSDERSIKNALEHAISIGSEGVVLKHYNSRYTVASRNDDWIK
VKPEYLEQFGENMDLIVIGKDPGKKDSLMCGLAVVEEDEPEIDEDGNEIVNLDSQDSIGE
GEDKEGNEIEREKTIKRFVSFCSIANGISQEEFKYIGRITKGCWKKSDEIPPPSDLLEFG
SRVPAEWIDPKDSIVIEVKARSLNNDEEATKKFKTGITLYGGYCRQIREDKDWKTCYTLS
ELRRMKRFKLGSNKRANNDATHALDSSKRRKARRIDYGFEKYFEQTPTTLDQSRIFDGLY
FYVISDVVDATGSRVSREELYDKILNRGGVIVHNVIAKHHGENQFRILCGKYTAECQSLI
DRGYDIIEPQWVLDCIKDDMLLKLEPKYCFNVSEELMKIAKRRVDGFGDSFEAQISEDSF
SRLIERNVRSLRNAPPSIQYDMVDTVPLFLFYGRTILLRIKDKALFTKLKVQIRLYGGKT
TGDLASCNLVVIQQNEIAVAKDVRSSLLKLTSDTDKPPVLPYIVTPEWIDSSISEGCQVP
EEDHPVV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaaagctgtgacaccgactctagacaacgacaccagaccagcaacaccgcat
aactttgcaccatccccctcatttagatggctatgcgatgagctatttgtgaaattagaa
aggattcaacaagcttccacttctaaggcctctaaagaattccaaaagcctataaatgtc
caatattatgaagtcattcaacatttcattaatctatggaggaaaactgtagggaatgat
atttatcctgcattgattttaatcctcccataccgtgatagaagaatatataacgttaga
gattatactttgattaaggcaatatgttcatatttgaaattacctaagaattcatttact
gaaaaaagattactaagttggaaacaacgtgctggaagatcagttagactatctagtttc
atcgttagtgaaatcaagaaaaggaaaagtgaaccacaagtcggtacaagggaggaaatt
acaatcgataagttaaatcaatgtctagattcgttatctgaagaaagaaatagtaaggga
agcatgggttatagagggttatcagattcaccaacattcgtattttgtttagagaatatg
acatttgttgaacttcaattctttttcgatattattttgaaaagtagagttatcggtggt
cacgaacataagttcttaaatgtttggcatcctgatgctcaagactacttaagcgtagtg
agtgacttgaaaactgtagcaaataaactctgggatcctgctgtccatttgaaaaatgat
gatttaactattaatgtcggctctcccttcgccccacaatcagcaaagaaactttccata
tcatatgagaagatctgcgctaaattgaaacatgattttttcattgaagagaaaatggac
ggtgagagaattcaattacactaccaggattatgggaataaattgagctttttgagcaga
cgaggaacagattatacttacctttacggcgaaagcattaaagatggaacggtttcaaaa
tacttacatcttgataataatgttcaaaattgtgtcctagatggtgaaatggtcacattt
gataaagaaagaaatgctctcctaccattcggtttggttaaaagtagcgcaaggagtatc
attacacaggaaggtgtggctaatgaaggttatcgtccattgctcatggtttttgatctc
gtttatcttaacggagtgtcgttagttaatattcctttgtatcaaagaaagctatattta
gaaaaaatctttactccagaaaggcatattgtcgaactactccgatcaaaacgttgttca
gatgaaagatcaataaaaaacgctttggaacatgctatatcaataggatcagaaggtgtt
gtgttgaaacattataattcccgatatactgttgcaagtagaaatgatgattggattaaa
gtaaagcctgaatatttggaacaatttggtgaaaatatggatttaattgtcattggaaaa
gatccgggtaaaaaggattctttaatgtgtggtttagcagttgttgaggaagatgaacca
gaaattgatgaagatggaaatgagatcgttaatctagactctcaggacagtataggtgag
ggggaagataaagaaggaaatgaaatagaaagggagaaaacaatcaagagatttgtctcg
ttctgttccattgcgaatggtatttcccaagaagaattcaagtacataggtaggataaca
aaggggtgttggaaaaaaagtgatgagataccaccacctagtgatctcttagaatttggg
agtagagtccctgcagaatggattgatcctaaagactctattgttatagaagtaaaagca
aggtcattaaataacgatgaggaagccactaagaaatttaaaacgggcattacgctatat
ggtgggtattgtaggcaaatcagggaggacaaagattggaaaacatgctacactttgtcc
gagcttagaagaatgaaaagatttaaattaggtagtaacaagagagccaacaatgatgct
acacatgctctggacagttctaaaagaagaaaggctcgtaggattgattatggctttgaa
aaatattttgagcaaacgcctacgactttggaccaatctagaatatttgatgggttatat
ttttacgttatctcagatgtagttgatgctacaggttctagggtgtcaagggaagaatta
tatgacaagatattaaatagagggggtgtcattgttcacaatgttatagcaaagcaccat
ggggaaaaccaatttagaattttatgtgggaagtacactgctgaatgccaatcattgatt
gatagaggttatgatatcattgaaccacaatgggtcttagattgcataaaagatgatatg
ttattaaagttagaacctaaatattgctttaatgtatcagaagagttaatgaagattgcc
aaaagacgagttgatggatttggagacagttttgaagcacaaatctcggaagattcgttt
tctagattaatagagaggaacgttcggtcattgagaaatgctccaccatctattcagtat
gatatggtagatactgttcccttatttttgttctatggtaggacgatcttgttaagaatt
aaagataaagccctctttaccaaattgaaagtccaaattagattgtatggcggtaagact
acgggcgacttggcttcttgtaatttagttgttattcaacagaatgagatagcagttgca
aaagatgttcgatcctcgttgttaaaacttacaagtgatactgataagccaccagtacta
ccttatattgtaacccccgaatggattgattcctccatttctgaaggttgtcaagtacct
gaagaagaccatccagttgtataa
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