Nocardioides dokdonensis: I601_0098
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Entry
I601_0098 CDS
T04431
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00521
Streptomycin biosynthesis
ndk00523
Polyketide sugar unit biosynthesis
ndk00541
O-Antigen nucleotide sugar biosynthesis
ndk01100
Metabolic pathways
ndk01110
Biosynthesis of secondary metabolites
ndk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I601_0098 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I601_0098 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I601_0098 (rfbC)
Enzymes [BR:
ndk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I601_0098 (rfbC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ANH36552
UniProt:
A0A1A9GFX9
LinkDB
All DBs
Position
98179..98736
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AA seq
185 aa
AA seq
DB search
MQVERARFDGVLVFTPQPLHDDRGLFVRTYDADVAGEHGLRPETFLQDSLSRTHRGVVRG
LHLRTGRGEAKLVRCSHGALFDVVVDLRPGSSTFGQWEGFELTGESQRSVYIPAGCAHGF
QSLTEPADTSYRIDRRHDPAESLTFAHDDPELGVQWPLPVVGLSAADRAAPPLSEVRHLL
GAAAR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggagcgggcacggttcgacggggtgctcgtcttcaccccccagcccctgcac
gacgaccgtggcctcttcgtgcgcacctacgacgccgacgtggccggcgagcacgggctg
cgacccgagacgttcctccaggacagcctgtcgcgcacgcaccgcggcgtcgtgcggggc
ctgcacctgcgcacgggccgcggcgaggccaagctggtgcgctgctcccacggggccctc
ttcgacgtcgtggtcgacctgcggccgggctcgtcgaccttcgggcagtgggagggcttc
gagctcaccggcgagagccagcgctcggtctacatcccggccggctgcgcgcacggcttc
cagtcgctcaccgagccggccgacacgtcgtaccggatcgaccgccggcacgacccggcc
gagtccctgacgttcgcccacgacgaccccgagctcggtgtgcagtggccgctgcccgtc
gtcgggctctcggccgcggaccgcgcggccccgccgctcagcgaggtgcgacacctgctc
ggcgccgcggcacgctag
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