Nonlabens dokdonensis: DDD_0420
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Entry
DDD_0420 CDS
T02441
Symbol
secD
Name
(GenBank) SecD/SecF/SecDF export membrane protein
KO
K12257
SecD/SecF fusion protein
Organism
ndo
Nonlabens dokdonensis
Pathway
ndo02024
Quorum sensing
ndo03060
Protein export
ndo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ndo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DDD_0420 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DDD_0420 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DDD_0420 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ndo02044
]
DDD_0420 (secD)
Secretion system [BR:
ndo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DDD_0420 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
MMPL
ACR_tran
PIG-F
Motif
Other DBs
NCBI-ProteinID:
AGC75547
UniProt:
L7W5S5
LinkDB
All DBs
Position
complement(485111..488179)
Genome browser
AA seq
1022 aa
AA seq
DB search
MQNKGLIRFFAIIFAIASIYQLTYTFITNKVEDDASAYASNVVNEDAENAASLRSAAEKR
YLDSIASQDVWGGFTNYSDAKSQELKKGLDLKGGINVILQVSVRDLLTGMADGSNDPAFN
AALDAADERIKDGQDDYFNYFIEEFNKIEGAELASPDIFANQEMQTKGIEFEMSNEQTEA
ILREELKDYMTSAFDVLRKRIDKFGTTQPNLQQLGTSGRILIELPGETDVKRIRDILTKA
AQLEFWQVYKSQEVSPYLSQANTYWANKLAAENTAEETEETVSDEVSELAEVAQDSTEAD
LGDLLNQDDTADATTDVDAVENFDDNPIFGRVQAFQGQGGIMAFKESDKDLIDSYLNDPQ
TRGMLTGELRNVKFAWGLPVLAETLGYEVVELYALKGNAQNEAPLSGGVITDASQQFGNS
GAPVVSMSMNGEGAKIWEDMTTEAYQNQNQVSVVLDNTVYSAPTVTNGPISGGQTQISGS
FTIDEAKDLATVLRAGKLPAKAEIIQSDVIGPSLGQEAIDSGLWSFGIALLLVLIWMIFY
YGRAGLYADVALLVNILFIFGALASLKAVLTLPGIAGIVLTIGISVDANVLIFERIREEI
AKGKSQADSIKDGFNNALSSIIDANVTTFLTAVILYVFGTGPIQGFATTLMIGILTSLFT
AIFITRLFVDGYVSNGKTIAFSTAITKNWFRNVNIDFLSKRKMAYVISAVLIVGSLASLA
INKLNLGIDFTGGRTVIVGFAQDVNATEITKQLSADDIFGSAEAKTYGTDNQLKISTKYG
INRDDSEVSQEIEDKLYKVLKPYLPADMTQTQFIDVSDENKKFGLRRTFQVGATIADDIL
TGSLYAILGSLIVVFLYILVRFRKWQFSLGAVAAVFHDVIIVLGAFSLLYKFLPFNMEID
QAFIAAILTVIGYSLNDTVVVFDRIREFINERTNWDFPRTVNGAISSTISRTLNTSLTTL
IVLLAIFIFGGESIKGFMLALIIGVIVGTYSSVFIATPVMYDTMNKSKGKLTPKEPKEEK
EA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaggactgatccgttttttcgcgatcatttttgcaatagctagtatatac
cagcttacctacacattcataacgaataaagtagaagacgacgcaagtgcttatgcaagc
aacgtggtaaatgaagatgcagaaaacgctgcttcattaagaagcgctgcagaaaaacgt
tacctagactctatcgcctctcaagatgtttggggtggttttaccaactattctgacgct
aaaagtcaagaacttaaaaaaggacttgaccttaaaggtggtatcaacgtgatacttcaa
gtttctgtaagagacttattaactggaatggcagacggttctaatgatcctgcttttaac
gcggcgcttgatgctgctgatgagcgtatcaaagatggacaggatgactatttcaactac
tttattgaagaattcaataaaattgaaggtgcagagcttgcttctccagacatttttgca
aatcaagaaatgcaaactaaaggaattgaatttgaaatgtctaatgagcaaacggaagca
attctaagagaagagcttaaagattatatgacgagtgcttttgatgtactgagaaagcgt
attgataaatttggtactacgcaacctaacctacaacagttgggtacttctggacgtatt
ttaattgaattacctggagaaactgatgtgaagcgtattagggatatcttgacaaaagcg
gcccagttagaattctggcaagtgtataagtctcaggaagtttctccatatttatctcaa
gcaaatacttattgggcaaataaattggctgccgaaaatacagctgaagagactgaagaa
actgtaagtgatgaggtatctgaacttgctgaagttgcacaagattctactgaagcagac
ttaggtgatttattgaatcaagatgatacagctgatgcaacaacagatgtagatgcggtt
gaaaactttgatgataacccaatttttggcagagtgcaagcttttcaaggtcaaggtggt
atcatggcttttaaagaaagtgacaaagatttaatagattcttatttaaatgatcctcaa
acaagaggaatgttaactggagaattacgtaatgtaaagtttgcatggggtttacctgtg
ttagcagagactttaggatatgaagttgttgaactttatgctttaaaaggaaatgcccaa
aatgaagcaccactttcaggtggagtaattactgatgcaagtcaacagttcggtaattct
ggtgctcctgttgtaagcatgtctatgaatggtgaaggcgctaagatctgggaagacatg
actactgaagcatatcaaaaccaaaatcaagtttctgttgtattagataatacggtttac
agtgcacctacagtaactaatggacctatttctggcggacagacacaaatttcaggaagc
tttactatcgatgaagcaaaagatcttgcaactgtattaagagctggtaaattacctgct
aaagcagagatcattcaaagcgacgttatcggaccatcattaggacaagaagcaattgat
agtggattatggtcatttggtattgcattgttattggttttaatctggatgattttttat
tatggacgtgctggtttatatgcagatgttgccctactagttaacatattatttattttt
ggagccttagcttccttaaaagcggttcttaccttacctggtattgcaggtatcgtttta
acaatcggtatatcggtagatgcaaacgttcttatttttgaaagaatacgtgaagaaatt
gcaaaaggtaaatcacaagctgatagtattaaagatggtttcaataatgcattgagctca
attatagatgcaaacgttaccacattcttaactgcagttatactttacgtttttggaaca
ggacctattcaaggttttgcaacaactttaatgataggtattcttacctctttatttaca
gcaatttttatcacaaggttgtttgtagatggatatgtaagtaatgggaagacaattgct
ttttctactgcgataactaaaaattggtttagaaatgtgaatatcgatttcttgagtaaa
agaaagatggcttatgtgatatcagcagttttgattgttggtagtttagcctctcttgca
atcaataaactgaacttaggtattgattttactggtggacgcactgtaatagtaggattt
gctcaagatgtaaatgcaaccgagattactaagcaattgagtgctgatgatatctttggt
agtgctgaagctaaaacttatggtactgacaatcaattaaaaatcagtaccaaatatggt
attaatagagatgatagtgaagtaagtcaagaaatagaagacaaactatacaaagtttta
aagccttatttaccagctgacatgactcagactcaatttatagatgtgagcgatgaaaat
aagaagtttggtcttagacgaacattccaagtaggagcaacaattgcagatgatatttta
actggatcgctttacgctattttaggttcattgatcgttgtcttcttatatatattagtc
cgtttccgtaaatggcaattctcacttggtgcagttgctgctgttttccatgatgttata
attgttttaggagcattctcattattatataaattcttaccatttaatatggaaatagac
caagcgtttattgctgctatattaaccgtaatcggttactctcttaacgataccgtggta
gtatttgatagaatacgtgaatttattaatgaaagaacgaactgggatttcccaagaacg
gttaacggcgcaataagtagtacgatctctcgtaccttaaatacatcgttgactacttta
atcgtattactagctatctttatttttggaggagaatctattaaaggtttcatgcttgct
ttaattataggtgtaattgtaggaacatattcttccgtatttatagctactccagtaatg
tatgacactatgaataaatcaaaaggaaaattaacacctaaagagccaaaagaggaaaaa
gaagcataa
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