Novosphingobium decolorationis: HT578_12700
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Entry
HT578_12700 CDS
T07993
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
ndr
Novosphingobium decolorationis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
QVM84435
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Position
2748752..2750362
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AA seq
536 aa
AA seq
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MEAFAALLDTLVYTRSRNAKIAALARYLRDTPDPDRGYALAALSDGLDFAAVKGSTIRAL
MRERVDPELWTLSRDYVGDSAETASLLWPEPEEAPGPPPTVAEAVDALAAMTRSTVASEL
PALLDRLDAEGRYALLKLATGAMRIGISARLAKTAFAQAFDVAIEDVEEHWHGQSPPYTA
LFDWAAHGSAPPDTENLLLFRPFMLAHAFEADDLDLDAYVAEWKWDGIRVQAVHAPGESG
TGESRLYSRSGDDISASFPEIPAALDVACVLDGELLVRGEAQGGKEGGAASFNALQQRLG
RKTVSKKMLREAPAFVRLYDVLQIEGEDLRPLPWSRRREALESLLHRLDPERFDLSRLID
VPGFAELAALRENARDAAIEGVMLKRRDSPYVAGRKTGLWYKWKRDPLLIDCVLMYAQRG
SGKRSSFYSDFTFGCWDGDPDGEGQLLPVGKAYFGFTDAELKDLDRHVRQHTVNRFGPVR
ETDKSLVLEVAFDSVHASARHKSGLAMRFPRIHRIRSDKPAHEADRIESLRALIRD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttcgccgcgctcctcgacacgctggtctatacccgcagccgcaacgccaag
atcgccgccctcgcgcgctacctgcgcgacacgcccgatcccgaccggggctatgcgctg
gccgccttgtccgatggactcgactttgcggccgtgaaaggcagcacgatccgcgcgctg
atgcgcgaacgggtcgatcccgaactctggactctcagccgcgattacgtgggcgacagc
gccgaaaccgccagtctgctctggcccgaaccggaggaagctcccggaccgcctccaacg
gttgccgaggccgtcgacgcgctggccgcgatgacacgctccacggtcgcaagcgaactt
cctgcccttctcgaccggcttgacgccgagggacgctacgcgctcctcaagctggccacc
ggcgccatgcgcatcggcatctccgcgcgcctcgccaagacggctttcgcgcaagccttc
gatgtggcgatcgaagacgtggaggagcactggcacgggcaatcgcccccctataccgcc
ctgttcgactgggccgcccacggctcagccccgcccgacaccgagaacctgctccttttc
cgccccttcatgcttgcgcatgccttcgaggccgacgacctcgacctcgacgcctacgtg
gccgaatggaaatgggacggtatccgcgtgcaggcagtccatgcccccggcgagagcggc
acgggcgagagccgtctctactcccgctcgggcgacgatatttcggccagcttcccggaa
atcccggccgcgctcgacgtggcctgtgtcctggatggcgaactgctcgtgcgcggcgag
gcgcaaggcggcaaggagggcggcgcagccagcttcaacgcgctgcagcagcgcctcggg
cgcaagaccgtctcgaagaagatgctgcgcgaggcccccgccttcgtgcggctctacgac
gttctgcagatcgaaggcgaggatctccgccctctgccctggtcccggcgccgcgaagcc
ctcgaatcgctgctgcaccggctcgacccggaacgcttcgacctctcacggctgatcgac
gtgcccggctttgccgaactggccgccttgcgcgagaacgcccgcgacgcggccatcgaa
ggcgtgatgctcaaacggcgcgacagcccctacgtcgcgggccgcaagaccggcctgtgg
tacaagtggaagcgcgatcccctgctgatcgactgcgtgctgatgtacgcccagcgcgga
tcgggcaaacgctcctcgttctattccgatttcactttcggctgctgggacggcgatccc
gacggcgagggccagctgctgcctgtcggcaaggcctacttcggcttcaccgatgccgag
ctgaaggacctcgaccgccacgtgcgccagcacacggtcaaccgcttcggcccggtgcgc
gagaccgacaagtcgctggttctcgaggtcgccttcgattcggttcacgccagcgcgcgc
cacaagtcgggccttgccatgcgctttccgcgcatccaccgcatccgttcggacaagccc
gcgcacgaggcggaccggatcgaatctctcagagccttgatacgggactga
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