Candidatus Nitrosotalea devanaterra: NDEV_0508
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Entry
NDEV_0508 CDS
T04889
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ndv
Candidatus Nitrosotalea devanaterra
Pathway
ndv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDEV_0508 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_0508 (tfb)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NDEV_0508 (tfb)
Prokaryotic type
Archaeal type
TFB
NDEV_0508 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Auto_anti-p27
Cyclin_C
Trm112p
Motif
Other DBs
NCBI-ProteinID:
CUR51273
UniProt:
A0A128A1N6
LinkDB
All DBs
Position
1:complement(454057..455019)
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AA seq
320 aa
AA seq
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MTTITELQTHCPECRSNLIDDIHSGEKICSGCGLVAMEQMPDYGTESRATNPEEKMKLTR
ASGQTSYAQHDLGIRTEIALGTKDFSGRTISSDVANQMYNLRKWQTRIRVASPEERRLAN
ILAKIGETCHALSLPRNVIESASMIYRNFQGQADAKGKSVACMSAATIYMACKQCDVVRS
LDEICAATGSSKEENLNVKLTAKYYRILVMELGSKTAPVVTLEKYISKIANLAKLEVRVE
RLAAEIAEKTSDHSLADGKAPNGLAAAYLYIASTLLGQSILQRDVSSVAGITEVTIRNRC
KEILTAYKMKVTLRQSLVKN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaataacagaattacaaacacattgcccggaatgtcgttctaatttgattgac
gacattcacagtggcgagaagatttgttctggctgcggattggtcgcaatggaacagatg
ccagattatggaactgaatcaagagcaacaaatcccgaagaaaaaatgaagttgacaaga
gcatcaggacagacaagttatgcgcagcatgacttgggaatcaggacagagattgcattg
ggaacaaaagacttcagtggaagaacaatatcaagcgatgttgcaaatcagatgtacaac
ctaagaaaatggcagactaggataagggttgcatctccagaagagcgaagactagcaaac
attttggcaaagataggagaaacatgtcatgcattatcattgccaagaaatgttatcgag
tcagcatccatgatatacagaaacttccagggacaggcagatgcaaaaggcaaatcagtt
gcgtgcatgtcagctgcaacaatttacatggcatgcaaacaatgtgatgtagtaagatcc
cttgacgaaatttgtgctgcaacaggaagttcaaaagaagaaaatctcaatgtcaaactg
actgcaaaatactatagaatacttgtgatggaacttggctctaaaacagcaccggttgta
actcttgaaaaatacatatcaaaaatagcaaatctggcaaaacttgaagttcgtgtagaa
agacttgctgctgaaattgcagaaaagacatctgatcacagtcttgcagacggaaaggca
ccaaatggattagccgctgcatacctgtacatagcatcaacccttcttgggcagagcatc
cttcaaagagatgtctcaagcgttgcaggaataacagaagtcaccataagaaacagatgc
aaggaaattctcacagcatacaagatgaaagttacattacgacagtcgttagtcaagaac
taa
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