Nitrosotalea devaniterrae: NDEV_0508
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Entry
NDEV_0508 CDS
T04889
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ndv
Nitrosotalea devaniterrae
Pathway
ndv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ndv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NDEV_0508 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndv03021
]
NDEV_0508 (tfb)
Transcription machinery [BR:
ndv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NDEV_0508 (tfb)
Prokaryotic type
Archaeal type
TFB
NDEV_0508 (tfb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RESC5
Cyclin_C
Auto_anti-p27
Trm112p
Motif
Other DBs
NCBI-ProteinID:
CUR51273
UniProt:
A0A128A1N6
LinkDB
All DBs
Position
1:complement(454057..455019)
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AA seq
320 aa
AA seq
DB search
MTTITELQTHCPECRSNLIDDIHSGEKICSGCGLVAMEQMPDYGTESRATNPEEKMKLTR
ASGQTSYAQHDLGIRTEIALGTKDFSGRTISSDVANQMYNLRKWQTRIRVASPEERRLAN
ILAKIGETCHALSLPRNVIESASMIYRNFQGQADAKGKSVACMSAATIYMACKQCDVVRS
LDEICAATGSSKEENLNVKLTAKYYRILVMELGSKTAPVVTLEKYISKIANLAKLEVRVE
RLAAEIAEKTSDHSLADGKAPNGLAAAYLYIASTLLGQSILQRDVSSVAGITEVTIRNRC
KEILTAYKMKVTLRQSLVKN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaataacagaattacaaacacattgcccggaatgtcgttctaatttgattgac
gacattcacagtggcgagaagatttgttctggctgcggattggtcgcaatggaacagatg
ccagattatggaactgaatcaagagcaacaaatcccgaagaaaaaatgaagttgacaaga
gcatcaggacagacaagttatgcgcagcatgacttgggaatcaggacagagattgcattg
ggaacaaaagacttcagtggaagaacaatatcaagcgatgttgcaaatcagatgtacaac
ctaagaaaatggcagactaggataagggttgcatctccagaagagcgaagactagcaaac
attttggcaaagataggagaaacatgtcatgcattatcattgccaagaaatgttatcgag
tcagcatccatgatatacagaaacttccagggacaggcagatgcaaaaggcaaatcagtt
gcgtgcatgtcagctgcaacaatttacatggcatgcaaacaatgtgatgtagtaagatcc
cttgacgaaatttgtgctgcaacaggaagttcaaaagaagaaaatctcaatgtcaaactg
actgcaaaatactatagaatacttgtgatggaacttggctctaaaacagcaccggttgta
actcttgaaaaatacatatcaaaaatagcaaatctggcaaaacttgaagttcgtgtagaa
agacttgctgctgaaattgcagaaaagacatctgatcacagtcttgcagacggaaaggca
ccaaatggattagccgctgcatacctgtacatagcatcaacccttcttgggcagagcatc
cttcaaagagatgtctcaagcgttgcaggaataacagaagtcaccataagaaacagatgc
aaggaaattctcacagcatacaagatgaaagttacattacgacagtcgttagtcaagaac
taa
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