Neisseria chenwenguii: BG910_00790
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Entry
BG910_00790 CDS
T05718
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nei
Neisseria chenwenguii
Pathway
nei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG910_00790 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nei03400
]
BG910_00790 (mfd)
Enzymes [BR:
nei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG910_00790 (mfd)
DNA repair and recombination proteins [BR:
nei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
BG910_00790 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
MFD_D3
Helicase_C
CarD_TRCF_RID
ResIII
ERCC3_RAD25_C
UB2H
Glyco_tran_WecG
AAA_30
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ASK28384
UniProt:
A0A220S4F6
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All DBs
Position
164181..167639
Genome browser
AA seq
1152 aa
AA seq
DB search
MTYPIPAPAQKSRWLHLSRGSLPLVLAEKLPEKNLKVVFTQDAEQALRLQTAWQFFRPQD
TAVFLPDWETLPYERFSPHQDLVSERLSALWLVKSGAADVLFVPVATAMQRLAPVSFLAG
RTFWLKTGQTLDVDALRKSMVDAGYSAVSNVVAAGEFAVRGGIVDLFPMGADTPYRIDLF
DDEIDSIKTFDPDTQRTLAPVSEIRLLPAHEFPTDGEAQKIFRARFRDEIDANPNQAAVY
KAVSSARFGAGVEYYLPLFFEDECATLFDYIGGDALAVCMGDVHAAAARFAADVKSRFTM
AQGDETYPPLHPQHLYLSADQFAGRLKNYPQILPDLDATHDLPDVAVNRQSETPLAALQN
FQTAFGGRVLLCAESAGRRETMLGFFVQHGLKPKSVDGWQAFLDSDAPLAITVTPLAYGF
QTGTAGRAFIPDTDGASPPTSGINARPTPPLAVITESDLYQYIAKSRTTRRRKHAQVSDG
LLRDLAEISIGDPVVHEEHGIGRYMGLVNMDLGGEAAEMMLLEYAGEAQLYVPVSQLHLI
SRYSGAARENVQLHKLGAAAWNKAKRKAAEKARDTAAELLNLYAQRAAQQGFKFEFSESD
YQAFADGFGYEETEDQAAAIASVIKDLTQGKPMDRLVCGDVGFGKTEVALRAAFVAVMGG
RQVAVLAPTTLLVEQHAQNFADRFADFPVKVAQLSRFNSSKETRAALEGMENGTVDIVIG
THKLVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTLTATPIPRTLSMALEG
LRDFSLITTAPSRRLAVKTFVKPFSEAHIREAVLRELKRGGQVFFLHNEVDTVENMRKRL
ETLLPEARIGIAHGQLRERELEQVMRDFLQQKFNVLLCSTIIETGIDIPNANTIIINRAD
KFGLAQLHQLRGRVGRSHHQAYAYLLTPEFITKDAEKRLDAIAAADDLGAGFTLAMQDLE
IRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRVPDLDAPLGVTTEIKLHSPAL
LPESYCPDIHERLVLYKRLAAADTEAQINAVHEELVDRFGLPEQPVKTLIESHRLRLSAK
ALGISGIDASSEAATFTFGKHTSVEPADIILLMQSNKNYRFSGADKLRVEAVMEDVETRI
NTVKAILKKLGK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccccatccccgcccccgcccaaaaatcccgttggctgcacctttcgcgtggt
tcgctgccgctggtgcttgccgaaaagctgcctgaaaaaaacctcaaagtcgtgttcacc
caagatgcagaacaagcgttgcggcttcagacggcctggcagtttttccgcccgcaagat
accgccgtgttcctgcccgattgggaaacgctgccgtatgagcgtttttcgccgcatcag
gacttggtttccgagcggctttcggccttgtggctggtgaaaagcggcgcggcggacgtg
ctgtttgtgcctgtggcgacggcgatgcagcggcttgcgccggtgtcgtttctggcggga
cgcacgttttggctgaaaacggggcagacgctggatgtggatgcgctgcgcaaaagcatg
gtggacgcaggttacagcgcggtgtcgaatgtggtcgcggcgggcgagtttgccgtgcgc
ggcgggattgtggatctgtttccgatgggggcggatacgccgtatcgtattgatttgttt
gacgatgaaatcgacagcatcaaaactttcgaccccgacacgcagcgcacgctcgcgccg
gtttccgaaatccgcctgctgccggcgcacgagtttccgaccgacggcgaggcgcagaag
attttccgcgcgcgtttccgcgacgaaatcgacgccaatcccaatcaggccgcggtttac
aaggccgtgagcagcgcgcggttcggcgcgggggtggaatattatctgccgctgtttttt
gaagacgaatgcgcgacgctgttcgactacatcggcggcgacgcgctggcggtgtgcatg
ggcgacgtacacgcggcggcggcgcgctttgcggcggacgtgaagtcgcgctttacaatg
gcgcagggcgacgaaacctacccgccgttgcatccacagcatttgtacctctctgccgat
cagtttgcaggccgtctgaaaaactatccgcaaatcctgccggacttggacgcaacccac
gatctgcccgatgtggcggtgaaccgccagtctgaaacgccgctggccgcgctgcaaaat
tttcagacggccttcggcggacgggtcctgctctgcgccgaaagcgcggggcggcgcgaa
accatgctcggctttttcgtccaacacggcctgaaacccaaaagcgtggacggctggcag
gcgtttttggacagcgatgcgccgctggcaattaccgtaacaccgttggcttatggtttt
cagacaggcacagcaggccgggcattcatacccgacaccgacggtgcatccccccccacg
tcgggcatcaatgcccgacctacaccgcccctcgccgtcattaccgaatccgacctctac
caatacatcgccaagtcgcgcaccacgcggcgcaggaagcacgcgcaggtttcagacggc
ctgttgcgcgatttggcggaaatcagtatcggcgatccggttgtgcacgaggaacacggc
atcggccgctacatgggcttggtgaacatggatttgggcggcgaggcggcagagatgatg
ctgctcgaatacgcgggcgaggcgcagctttatgtgcctgtttcgcaactgcatttaatc
agccgctactcgggcgcggcacgggaaaatgtacagctgcacaaactcggcgcggcagcg
tggaacaaagccaagcgcaaggcggcggaaaaggcgcgcgacacggctgccgagctgctc
aatctctatgcccaacgcgcggcgcagcagggcttcaaattcgagttttccgaaagcgat
tatcaggcgtttgccgacggtttcggctacgaggaaacggaagaccaggcggcggcgatt
gcgtctgtaatcaaagacttaacgcagggcaagccgatggacagactggtgtgcggcgat
gtaggcttcggcaaaaccgaagtggcgctgcgggcggcgtttgtggccgtgatgggtggg
cggcaggtggcggtgctggcgccgaccacgctcttggtggagcagcacgcgcaaaatttt
gccgaccgtttcgccgatttccccgtcaaagtcgcccagctttcgcgtttcaacagcagc
aaggaaacccgtgccgcgctggaaggcatggaaaacggcacggtggatattgttatcggc
acgcataaattggtgcaggacgatataaaattcaaaaacttaggcttggtaatcatcgac
gaggaacaccgtttcggcgtgcgccagaaagagcagctcaaacgcctgcgcgccaacgtc
gatattctcacgctcaccgccacgccgattccgcgcacgctcagcatggcgctggaaggg
ctgcgcgatttctctctgattaccaccgcgccgagccgccgtttggccgtgaaaactttt
gtaaagccgttcagcgaagcgcacatccgcgaggctgttttgcgcgaactgaaacgcggc
ggtcaggtttttttcctgcataatgaagtggataccgtcgaaaatatgcgcaaacgcctc
gaaaccctgctgcccgaagcgcgcatcggcatcgcccacggccagttgcgcgagcgcgaa
ctcgagcaggtgatgcgcgactttttgcagcagaaattcaatgtgttgctctgttccacc
atcatcgaaaccggcatcgacatccccaatgccaacaccattatcatcaaccgcgccgac
aaattcggcctcgcccaactgcatcagctgcgcggacgcgtcggccgcagccaccaccag
gcctacgcctacctgctcacgcccgaattcatcaccaaagacgccgaaaaacgcctcgac
gccatcgccgccgccgacgatttgggcgcaggcttcacgctcgccatgcaggatttggaa
atccgcggtgccggcgaaatcctcggcgaaggccaaagcggcgaaatgatgcaggtcggc
ttcacgctctacaccgaaatgctcaaacaggccgtgcgcgatctcaaaaaaggccgcgtg
cccgacctcgacgcgccgctgggcgtgactaccgaaatcaagctgcacagccccgccctg
ctgcccgaaagctactgcccagacatccacgagcgcctcgtactctacaaacgcctcgcc
gccgccgacaccgaagcgcaaatcaacgccgtacacgaagaactcgtcgaccgcttcggc
ctgcccgaacagcccgtcaaaaccctcatcgaaagccaccgtctccgcctctccgccaaa
gcgctgggcatttccggcatcgatgcctcaagcgaagccgccacgtttaccttcggcaaa
cataccagcgtcgaacccgccgacatcattttgctgatgcagagcaacaaaaactaccgc
ttctccggcgccgacaaactgcgcgtggaagcggtgatggaagatgtggaaacgcggata
aatacggtgaaggcaatattgaagaagttgggaaaatga
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