Neisseria sp. KEM232: CGZ77_06810
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Entry
CGZ77_06810 CDS
T05913
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nek
Neisseria sp. KEM232
Pathway
nek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGZ77_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nek03019
]
CGZ77_06810
Enzymes [BR:
nek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGZ77_06810
Messenger RNA biogenesis [BR:
nek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGZ77_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASP17480
LinkDB
All DBs
Position
complement(1371732..1373099)
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AA seq
455 aa
AA seq
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MNPFSSLGLGQEIVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYATPSTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRHTVLFGGVNMDK
QTADLRAGCEIVVATVGRLLDHVKQKNIHFNKVEIVVLDEADRMLDMGFIDDIRAIMQML
PRERQTLLFSATFSDPIRKLAQDFMNAPELVEVAAQNTANANVEQHIIAVDTFKKRHLLE
RLIVDLDIKQVIVFCKTKQSVDQVTRDLQRREIAAQAIHGDKSQQSRLETLAAFKEGSLR
VLVATDVAARGLDIAELPFVINYELPAQPEDYVHRIGRTGRAGADGVAISLMDENEQKMF
EAIKELTGSDIAVERIEGFEPQWWDKGTQESAAQRPSENRRRSDSARSEERRPRREADKG
RDAGDSCGRIAGRSRRNRRGERVKCALVLPNFGVK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttcctcattgggtttgggtcaggaaatcgtctctgccctcaccgatcag
ggctacgaaaaccccacgcccatccaggccgccgccattcccaaagccctggccggacac
gatctgctggctgccgcgcaaaccggcaccggcaaaaccgccgccttcatgctgcccagc
ctcgagcggctcaaacgctacgccaccccctccacctcgccagccatgcaccccgtgcgc
atgctcgtgctcacgcccacgcgcgaattggccgaccaaatcgaccaaaacgtgcagggc
tacatcaaaaacctgcccctgcgccacaccgtccttttcggcggcgtgaatatggacaag
cagaccgccgatttgcgtgccggctgcgaaatcgtcgtcgccaccgtcggccgcctgctc
gaccacgtcaaacagaaaaacattcacttcaacaaagtcgaaatcgttgtcctcgatgaa
gctgaccgcatgctcgacatgggtttcatcgacgatatccgcgccatcatgcagatgctg
ccgcgcgagcgccaaaccctgctcttttccgccaccttctccgaccccatccgcaagctc
gcgcaagactttatgaacgcgcccgaactcgtcgaagtcgccgcgcagaataccgccaat
gccaacgtcgaacagcacatcatcgccgtcgacaccttcaaaaaacgccacctgctcgaa
cgcctcatcgtcgatttggacattaagcaggttatcgtcttctgcaaaaccaaacaaagc
gtcgaccaagtcacccgcgatttgcagcggcgcgaaattgccgcccaagccatccacggc
gacaaatcccagcaaagccgcctcgaaaccctcgccgccttcaaagaaggcagcctgcgc
gtcctcgtcgccaccgacgtcgccgcccgcggcctcgacatcgccgagctgccctttgtt
atcaactacgagctgcccgcccagcccgaagactacgtccaccgcatcggccgcaccggc
cgcgccggcgccgacggcgtcgccatctcgctgatggacgaaaacgaacagaaaatgttc
gaagccatcaaagagctgaccggcagcgacatcgccgtcgaacgcatcgaaggcttcgaa
ccgcaatggtgggacaaaggcacacaggagagtgccgcgcagaggccgtctgaaaaccgc
cgccgcagcgacagcgcccgcagcgaagagcgccggccgcgccgcgaagccgacaaaggc
agggacgccggcgactcctgcggcagaatcgccggacgcagcaggcgcaaccggcgcggc
gagcgcgtcaaatgcgccctggtactgcccaacttcggcgtgaaataa
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