Neorhizobium sp. NCHU2750: NCHU2750_39330
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Entry
NCHU2750_39330 CDS
T05650
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCHU2750_39330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nen02000
]
NCHU2750_39330
Enzymes [BR:
nen01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCHU2750_39330
Transporters [BR:
nen02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCHU2750_39330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_16
AAA_29
AAA_22
AAA_30
ABC_ATPase
Mg_chelatase
DUF3995
AAA_23
AAA_21
DUF6257
ZapB
MMR_HSR1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AYD03318
LinkDB
All DBs
Position
complement(4134539..4136320)
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AA seq
593 aa
AA seq
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MKAEKDKKRHVDSTTVVSVLKRIISENGRDHIRGYVFAVSCLIMVALSTAFTAWIMESVV
NEAFANKRADIVWLICGSILAAFVLRGFATYGQAVALSKISNNIVARYQRRLYSHLMTLS
VGFFSEARSAHLAAQISQNIAGIRDVMNLTVTSTARDLLTLVSLIAVMIGKDWVLSLIVF
AVAPPLLYALRYVSRRLRLATRDSVEVNSRVLGAMQETAQGIAVVKAFTMEQELERKVNK
IIDTAEHRSNRIARLSERTSPLTETFAGFAISSVLAYAAFRSIYNNVPPGAFFSFVTALL
MAYDPARRLAKLQVQMDRAVVNAQMIYALLDLQPAQREKPGAPALSISEAKVELKDVVFS
YAAGSPILRGVNLVAEGGKTTALVGPSGAGKSTIINLIPRFYDPAEGQILVDGQNIADVT
KASLRQQLAYVSQQPYLFEGSIRDNIRYGRPDATDAEVEEAARLAYAHDFITAQPEGYDT
PVGENGVTLSGGQRQRLSIARALVRNAPILLLDEATSALDNESEAAVQKALDTAMRGRTV
IVIAHRLSTVVNADKIVVMQDGRVVEEGTHEELARRKQGLYARLNNLQAPEHN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggctgaaaaagacaaaaagcgccacgttgattccactaccgttgtcagcgtcctg
aagcgcatcatttcggagaacggccgggaccatatccgcggatatgtgtttgccgtctcc
tgtctgatcatggtggcgctgtcgaccgcgtttaccgcttggatcatggaatcggtggtc
aacgaggccttcgccaacaagcgggcggacatcgtgtggctgatctgcggctcgatcctc
gccgccttcgttctgcgcggcttcgccacctatggccaggcggtggctctttccaagatc
agcaacaatatcgtggcccgttaccagcgtcggctctatagccacctgatgacgctttcg
gtcggatttttctccgaagcccgctcggcgcatctggccgcgcagatcagccagaatatt
gccggcattcgggacgtgatgaacctgaccgtcacctccactgcaagagatcttctgacg
ctcgtctcgctgattgcggtgatgatcggcaaggactgggtgctgtcgctgatcgtcttt
gccgtggcaccgccgcttctctacgccctgcgctacgtgtcgcgccgtctcaggctcgcg
acgcgggattcggtcgaggtcaatagccgcgttctcggcgccatgcaggaaaccgcccag
ggcattgccgtggtgaaggccttcaccatggagcaggaactcgagcgcaaggtcaacaag
atcatcgacaccgccgaacaccggtcgaaccgtatcgcgcgcctttccgaacggacctcg
ccgctgacggagacctttgcgggttttgcgatatcgagcgtgctggcttacgcggcattc
cgttcgatctataacaacgtgccgccgggcgccttcttctccttcgtgacggcgctgctg
atggcctatgatccggctcgccggctcgccaagcttcaggtgcagatggaccgtgccgtc
gtcaatgcgcagatgatctatgcgcttctcgacctgcagccggcccagcgcgaaaaaccc
ggcgcgccggctctctccatcagcgaggcgaaggtcgagctcaaggatgtggtgttttcc
tacgccgccggctcccccattctgcgcggcgtgaaccttgttgccgagggcggcaagacg
acggctctggtcgggccttccggtgccggcaagtcgacgatcatcaacctcattccgcgc
ttctacgacccggcggaaggccagatcctggtcgacggccagaatatcgcggacgtaacc
aaggcctccctgcgccagcagctcgcctacgtgtcgcaacaaccctatctgttcgagggc
tcgatccgcgacaatatccgctatggccgtccggatgccacggatgccgaggtggaagag
gcggcaaggcttgcctatgcgcatgacttcatcaccgcgcagccggagggctacgatacg
ccggtcggtgaaaacggcgtgacattgtccggtggccagaggcagaggctgtcgattgcc
cgcgcgctggtacgcaatgcgccgatcctgctgctcgacgaggcgacctcggcgctcgac
aacgagtcggaagccgccgtgcagaaggcgctcgacacggcgatgcgcggccgcacggtg
atcgtcatcgcccaccgcctgtcgaccgtcgtcaatgccgacaagatcgtggtgatgcag
gatggacgcgtcgtcgaggaaggcacgcatgaggaacttgcacggcgcaagcagggtctt
tacgctcgcctcaacaatctgcaggcgcccgaacacaactga
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