Nitrosomonas europaea: NE1617
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Entry
NE1617 CDS
T00130
Name
(GenBank) Sigma factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
neu
Nitrosomonas europaea
Pathway
neu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NE1617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
neu03021
]
NE1617
Transcription machinery [BR:
neu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NE1617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
GerE
HTH_Tnp_ISL3
Sigma70_ECF
HTH_29
MPAB_Lcp_cat
TetR_C_28
HTH_28
MerR_1
HTH_3
Phage_Mu_Gp36
Motif
Other DBs
NCBI-ProteinID:
CAD85528
UniProt:
Q82U79
LinkDB
All DBs
Position
1745225..1745785
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AA seq
186 aa
AA seq
DB search
MHSRDHQEDVAPAANPAMQQVHFLYSDHHNWLYGWLRFRLGDAADLAHDTFVRLIARPRC
FDSSQEARAYLRTIANGLCIDLWRHREIERAWLETLATQPEAYAPSAEEQTAVLQALHEI
DGMLRHLPLKAARAFVLAMACGMTHQEVARELGVSSRMVGHYITRAMLHCMQLEARNLGQ
AGAIAP
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgcgtgatcaccaggaggatgtcgcaccagccgccaaccctgcaatgcagcag
gttcactttctctacagcgatcatcataactggctgtacggctggttgcgctttcgcctg
ggcgatgcggccgacctggcgcacgataccttcgtgcgcctgattgcccgcccccggtgc
ttcgacagcagccaggaagcccgcgcctacctgcgaaccatcgccaacggcctgtgcatc
gacctgtggcgccaccgcgagatcgaacgtgcctggctggagaccctggctacacaaccc
gaggcgtacgcgccctcggccgaggaacagacagcggtactgcaggcgctgcacgaaatc
gatggcatgctgcgccatctgccgctcaaagccgctcgggctttcgtcctggcgatggcc
tgcggcatgacgcaccaggaagtcgcgcgtgagctgggcgtgtcctcgcgcatggtcgga
cactacatcacccgagccatgctccattgtatgcagctcgaagcacgcaatctgggccag
gccggcgccattgctccatga
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integrated database retrieval system
