Candidatus Nitrososphaera evergladensis: NTE_02483
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Entry
NTE_02483 CDS
T03224
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NTE_02483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nev03400
]
NTE_02483
DNA repair and recombination proteins [BR:
nev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NTE_02483
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NTE_02483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
P-loop_SecA
Kinesin
AAA_30
AAA_22
AAA_7
ABC_tran
Tim44
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AIF84532
UniProt:
A0A075MV50
LinkDB
All DBs
Position
2044017..2046026
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AA seq
669 aa
AA seq
DB search
MRELKIYCPLLSATGKFRLADVFAPSGDQPEAIEKLAKNAQKGGRQTLLGVTGSGKTFTI
ANVIAKTNKNTLVISHNKTLAAQLYAEFKEFFPENNVGYFVSFYDYYQPESYIPQTDTYI
EKDTEVNEKIEKMRLEATAMLMSGEPTIIVATVSCIYSLGSPKEWESSSVALARGDIIDR
KAIIKSLVDARYERNDLALVPGTFRAKGDTIDIIPGYSDDVIRVSMFGDEIEKISIHDYV
SMKKLRDAGAVRIFPAKHYITAEDARQHAVRSIKSELQEWLPQLPSELEKQRLASRTKYD
LEMIEELGYCSGIENYSRHFDGRKAGEPPFCLLDFFGDDFLLVIDESHVTLPQLHGMHNG
DHTRKKSLVDFGFRLPSAYDNRPLKFEEFEKYLRNTVFVSATPGPYELKTSRQVVEQLVR
PTGLVDPKVEVRPTKNQMEDLIREIKARAKRDQRTLVTTLTKRMAEDLAEFLAKNEVRVR
YLHSEIEGLERTELIRQLRLGEFDVIVGINLLREGLDIPEVSLVAILDADKEGFLRNTTS
LIQTFGRAARNLDGKVILYSDRMTESMKEAMEETERRRKRQLEYNKRHKITPRTIVKPVP
ESTAPGEVAEAAETKSMTRRDLQKLAIETEATMKKYAEELEFEKAIMFREKLAKIKKALG
DVTPVTEVS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaattgaaaatttactgccccttgctctcagctacaggaaaattccgccttgca
gacgtatttgcccccagcggcgaccagccggaggccattgaaaagctggcgaagaacgcg
caaaagggcggaaggcagacgctccttggagtgacggggagcggcaagacgtttaccatt
gcaaacgtcatcgcaaaaacaaacaagaacacgcttgtcatatcgcacaacaagactttg
gcggcgcagctgtacgccgagttcaaagagttctttcccgaaaacaacgtcggctatttt
gtcagtttctacgattactaccagcctgaaagctatatcccgcagacagacacctacatc
gaaaaggacacagaggtcaacgaaaagattgaaaagatgcgcctcgaggcgactgcgatg
ctcatgtccggcgagcctacaatcatagtcgcgaccgtttcgtgcatatactcgcttggc
tctccaaaggaatgggagagcagctctgtcgcccttgccaggggggacatcattgacaga
aaggcgataataaagagccttgtcgacgcgcgctatgagcgaaacgaccttgcactcgta
ccgggaacgtttcgcgcaaagggcgacacgattgacatcatcccgggttactctgacgac
gtaatcagggtatccatgtttggcgacgagatagaaaagataagcatacacgactatgtc
agcatgaaaaagctgcgcgacgcaggcgcggtgaggatatttccagccaagcactacatc
actgcagaggacgcccgccagcacgcagtcaggtcgataaagagcgaactgcaagagtgg
ctgccgcagctgccttcagaactggaaaagcagcgccttgcctcaaggacgaaatacgac
ctagagatgatagaggagcttggctactgttcagggattgaaaattattcccgccacttt
gacggaaggaaggccggcgagccgccgttctgcctccttgacttttttggagacgacttt
cttcttgttatagacgagtcgcacgtaactcttccgcagctgcacgggatgcacaacggc
gaccacacgcgcaaaaagtcgcttgtggactttggattccgcctgccaagcgcgtacgac
aaccgccccctgaaatttgaagagtttgaaaaatacctgagaaacacggtctttgtctct
gccacgccgggcccgtacgagctaaagacaagcaggcaggtcgttgaacagttagtaagg
ccgacgggacttgtcgaccccaaggtcgaagtccggccgacaaagaaccagatggaagac
cttatccgcgaaataaaagccagggcaaagcgcgaccagcgcacgcttgttacaaccctg
acaaagaggatggctgaagaccttgcagaatttcttgccaaaaatgaagtgcgcgtgcgc
tacctccactccgagatagaggggctggaacgcacagaattgataaggcagttgcgcctt
ggcgagtttgacgtcatcgtgggcatcaacctgttaagagaaggcctcgacattccagag
gtctcgcttgtggcgatacttgacgcagacaaggagggctttttgcgcaacacgacaagt
ttgatacagacctttggcagggcggccaggaaccttgacggcaaggtgatactttattct
gacaggatgacagaatcaatgaaggaggcgatggaagaaacagagcgcaggcgcaagcgc
cagcttgaatacaacaagcgccacaagataacgccaaggacaatcgtcaagccggtgcct
gaaagcactgcgcccggcgaagttgccgaggcggcagagacaaagtccatgacgcggcgc
gacctgcaaaaacttgcgatagagacagaggcgacgatgaagaaatatgcagaagagctg
gaatttgaaaaagctataatgttccgggaaaagctggcaaagataaagaaggcgcttggc
gacgtaacgcctgtcacggaggtgtcctga
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