Nocardia farcinica IFM 10152: NFA_18150
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Entry
NFA_18150 CDS
T00207
Name
(GenBank) putative glycosyl hydrolase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00500
Starch and sucrose metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NFA_18150
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NFA_18150
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
DDAH_eukar
Motif
Other DBs
NCBI-ProteinID:
BAD56661
NIH_Japan:
nfa18150
UniProt:
Q5YYT0
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Position
complement(1981404..1983524)
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AA seq
706 aa
AA seq
DB search
MVQPDHSPSDVTPLGVWPGNAYPLGATYDGAGTNFSLFSEVAEAVDLCLIDRDGAETRVR
LDEVDGYVWHAYLPTIGPGQRYGFRVHGPYDPERGLRCDPSKLLLDPYGKAFDGDFDDDP
SLYTFGLDSLGHTMTGVVINPFFDWGADRAPNRPYHETVIYEAHVKGMTMTHPDVPEELR
GTYAGIAHPAVVEHLKSLGITAIELMPVHQFLHDRVLLDQGLRNYWGYNSFGYLAPHNGY
AASPRGGAAVTEFKAMVRALHAEGIEVILDVVYNHTAEGNHLGPTIAFRGIDNAAYYRLV
EDDPSKYMDYTGTGNSLNVRHPHTLQLIMDSLRYWILDMHVDGFRFDLAATLARELHDVD
RLSTFFDLVQQDPVVSQVKLIAEPWDVGEGGYQVGNFPGLWTEWNGKYRDTVRDYWRGEP
ATLGEFASRLTGSSDLYEATGRRPSASINFITAHDGFTLRDLVSYNEKHNEANGEDNRDG
ESHNRSWNCGVEGPTDDPEILALRAKQSRNLLATLILSQGTPMLAHGDEMGRTQQGNNNV
YCQDSPLSWMDWSLAETNADLLEFTRRVIGLRTEHPVFRRRRFLAGRPIRSAGAARDIAW
LTPGGEEMTPADWDSGFGKSLAVYLNGQGIPEPGPRGERITDDSFLLCFNAHHDPMDFVL
PGPGYGGPWLVALDCSAPDGRAEAQYDAAATVTVPARCLLVLRCPE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcccgaccactcgccgagcgacgtgacgcccctgggggtatggccggggaac
gcctatcccctcggcgcgacctacgacggggcaggcacgaacttctcgctgttctccgag
gtcgccgaggcggtcgacctgtgcctgatcgaccgcgacggcgccgagacgcgggtgcgg
ctcgacgaggtcgacggctatgtctggcacgcctatctgcccaccatcgggccgggccag
cgctacggattccgggtgcacggcccctacgatcccgagcgcggactgcgctgcgatccg
agcaaactactgctcgatccctacggcaaggccttcgacggcgacttcgacgacgatccc
tcgctgtacaccttcggcctggattcactcgggcacaccatgaccggcgtggtcatcaat
ccgttcttcgactggggcgccgaccgcgcgccgaatcggccctaccacgagacggtgatc
tacgaagcccacgtcaagggcatgacgatgacccatcccgacgtgcccgaggaattgcgc
ggcacctacgcgggcatcgcgcaccccgcggtggtggaacatctgaagagcctgggcatc
accgcgatcgagctgatgccggtgcaccagttcctgcacgaccgcgtgctgctggatcaa
ggtctgcgaaactactggggctacaacagtttcggctacctcgccccgcacaacggttac
gcggccagcccgcgcggtggggccgcggtcacggagttcaaggcgatggtgcgcgcgctg
cacgccgagggcatcgaggtgatcctcgacgtggtgtacaaccacaccgccgagggcaac
cacctcggcccgaccatcgccttccgcggcatcgacaacgcggcctactaccggctggtc
gaggacgatccgtcgaagtacatggactacaccggcaccggcaacagcctcaacgtccgg
cacccgcacaccctgcagctgatcatggattcgctgcggtactggatcctggacatgcac
gtcgacggcttccggttcgacctggccgccaccctggccagggaactgcacgacgtggac
cggctctcgacgttcttcgatctggtgcagcaggatccggtggtgagccaggtgaagctg
atcgccgagccctgggacgtcggcgagggcggctaccaggtcggcaacttccccggcctg
tggaccgaatggaacggcaagtaccgcgacaccgtgcgcgactactggcgcggcgagccc
gcgacgctgggcgagttcgcctcccggttgaccggctcctcggacctgtacgaggcgacc
gggcggcggccgagcgccagcatcaacttcatcaccgcccatgacggtttcacgttgcgg
gacctggtgtcctacaacgagaaacacaacgaggccaacggcgaggacaaccgcgacggc
gagagccacaaccggtcgtggaactgcggtgtggaaggccccaccgacgatccggagatc
ctggcgttgcgcgccaagcagtcccggaacctgctggccaccctgatcctgagccagggc
acgccgatgctggcgcacggcgacgagatgggccgcacccagcagggcaacaacaacgtc
tactgccaggactcgccgctgtcgtggatggactggtcgctggccgagaccaacgccgac
ctgctggagttcacccgcagggtgatcgggctgcgcaccgagcacccggtgttccggcgc
aggcgtttcctggcgggcaggccgatccgctccgccggggccgcccgcgacatcgcctgg
ctcacccccggcggcgaggagatgaccccggccgactgggacagcggcttcggcaagtcg
ctggcggtctacctcaacggtcagggcattcccgagccgggaccgcgcggcgaacgtatc
accgacgactcgttcctgctgtgcttcaacgcccaccacgaccccatggacttcgtcctg
cccggccccggctacggcgggccgtggctggtggcgctggactgctcggcgcccgacggc
cgggccgaggcgcagtacgacgccgccgcgaccgtgaccgtgcccgcccgctgcctgctc
gtgctccgctgccccgagtga
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